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Simple sequence repeat (SSR)
>UN16219
GTTTTAAGGGAAAATGAAAATAATCATACCATAAAAATACCTTTGAAATCATAATATACAACACATAACAAGGAAAGCTGAAATCAACAAAGGA
AATAATAAAAAAGCCAACAAACTTCCAACAACACAAAAGCAAAAGATGATCATCATTCAACACAATAACACATCATCATCATCATCATCATGAT
TCATATCTTTAATGATCATCCTTATCCTTCTTTTCCTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCTTCTCCTTAATCTTCTCCAAGATCC
CTTTCTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGCAACAACCGGTGCTGGTGGAGCATCTTCAGGCTTCTTTCCGTGTCCAGGAAGCTT
CTCCTTCAGCTTATCCATAAACCCTTTTTTCTCCTCCTCCTCTGTCTTCACCTCTCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTTCTTC
CTCTTCACACCATCTTCGCCTTCTTCCTCGCTCGAGGAGCTTGAAGAGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCT
CTTCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGCTCTGAGACGTGAACCTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTT
TGTTTCATCTTTCTTCTTCCCCAAGAAATCGAACAGTCCACGATCTGTAACCTCTGTGGCCCCTGCTGATGATTCCTCCGACTCTACCTTTGGC
ACCTCAACGTTCTTGGTTTCCTCTGCCATAGTTATCGGGAAAAGTTTTGTTTGCTCTGCTGATGAGAATACGAAACGATCAAATGTATACTTGA
GATGATTTGTAAGAGACGAATGATCC |
Primers for UN16219 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGCCAACAAACTTCCAACAA |
59.64 |
21 |
GAAGCCTGAAGATGCTCCAC |
59.957 |
20 |
252 |
105 |
356 |
2 |
AAAGCCAACAAACTTCCAACA |
59.64 |
21 |
GAAGCCTGAAGATGCTCCAC |
59.957 |
20 |
253 |
104 |
356 |
3 |
AAGCCAACAAACTTCCAACAA |
59.64 |
21 |
CGGAAAGAAGCCTGAAGATG |
59.948 |
20 |
258 |
105 |
362 |
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