 |
Simple sequence repeat (SSR)
>UN16244
AGTTTAAAACCCATAGGAGGTCTATTTGTTTATTCCGAGTTTAAGCATACGTTTCTTTCAAGAACAAGCACTGTTTCCATATATTAAAAGAGTT
TTTGAGTCGATGTTGCTTACAAAAAATGCGTACCAAAAAGATTAAAGGGATTGAGGACTAGTAGAAGGTCTGATCATGGAAGGCATTTTCATAA
GTCTGTCTCTTTCCATCTTGTTCTTGAAAGAGTGCTTAGGCGTTATGGACATCTTGTCCATTGCGTAATCAAGATCACCTTCTTCCTCCTCTTC
TTCATCACTCTCCTCATCCCCATTCACAATTATCTCAGCATCGTCACATCATCATCGTCATCTTGGTTCATCACCGTTGACCAGTAGATGAAAT
TCGGGGAGATGACGCTGTTAGATCTTTTCAGCAAGTAAGGGTCAAAGGGGAAGAATGTATCAAGTCTCTCACGCCCGCCAAACGCACGAGAAAG
CTCAGACTCAAGCAGGTCATCGAAAATGAAGGAGTCTGAGACGACGAACAGACCAACTGCTTTAGCTTGTTTAAGGAACTCTGCAACTACCGAT
GGAAGGCATACCATCAATGGGTTTAGTTTGTGCATTAAAATTGACTCCAATGGTATAAGCTCGGACCGAAAGCGAGGAACATCTAGGATGGATC
TCATACGGAAGCACAGCACATACATGATCGCCTGACATCCTGAATAGAAAAGCTGATGTGCTTCAGGCCTTGTATCATCATTGCAGATTCTACA
GTAATCCGCACACTCATCTACTAACCTTTTTAACATGCTAGCCACATAGGAAACAGGTAAAAACTTTCCGCGAGCCAAGTAGCTAGCTAGATAA
GCCACCGCACTCATCCTAGTAGGTCGAGGCTTGTTGCTGGAGAGAAAAATGTCCAGCAGCTTACTCCCAAATTTCACACCACAATTTTCAGGAT
CCAGTGAACATGCATAGAACATGAGAAACTGGGAAACTTTGGATTTGTAGGTATTCAGGATGAAGTTCTCAAATGACTCGAAGAGCTTTTCAAA
CACCTGATCCAAACGACCAGCATCTTGACAGGATTCAAGATGATCAAAAGATGTGACCATCAATTTGTCCAACGACTCAAAAGCTATCTTTCCA
CTTGATGTATCCTGATTTACAGACCCCGCTGGAAGCTCGTCTCCTTCATTCATACCATCTTCAAGTTCCATATCAAACATGCCTCTACTAGAGT
CATCTTGCGGAATATCATCCCAATCAATCTCCAAATCCAAATCTCGTAGCCTCTCCATCACCATCATAAAGATCATGTTGCCACCAACTTGACC
GATTGAGCTACTCTCCAACTTCAATAAGTTCTCCACATAAGTCACTACCACCTGGTCCTGGTCTTTTTGTTCATTTTGGGCATCTGCTGGGAGA
GCATGGGGAATAGTCTCGAGGGAGCAAGAGGAACCAAAAGAGAGATCTCCAGAAGAGCCTCATGAACGCGAGAAAGAACTTCTCCCTTCTGGGT
GCTTACACGGCTTTGTGAAAGTCTATTGATTACCCAAGGCGGTGGAACGAAGTGTCTTACGAGCATATGCAGACAAGAGTCCAGATACTTTCCA
CTGGTGGCAGCCAGTGATATGAGTAGGCCCACCAATGCATCCATGATAAGAGGTCTCTGATTCCACAATGACATTCCAAATATCGCAGAGAGAA
GCTTTTGATGGTGAGTGATATCTATGCAAGCCACAGAGCCTGATAAAGCTTTCAAGAGTGTATTAAGCTCAGCAGCAGCAGCAGCATCAGATCT
ATCGTTGATCTGAATTGTTTCAACAAGCTGGTCGAAACGGTCTGATTCCCCATTCTGGGCAGATGCAAGGGCGTTTCTCACGCCCTGCACCGTT
TCAGTGTCACACGAATCATTGTTGCCCACATCATATAAGCTTGACGGATCAGTAAAAACCTCTGCTGCTCCCATCCTCTTGTGTGATTTGTTTT
TACCTACAGGTTTAATAATTGAAGTAGCTTTTGTTTCGCC |
Primers for UN16244 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCACCAATGCATCCATGATA |
60.159 |
20 |
AATCAGACCGTTTCGACCAG |
60.111 |
20 |
207 |
1627 |
1833 |
| 2 |
CCACCAATGCATCCATGATA |
60.159 |
20 |
TCGTGTGACACTGAAACGGT |
60.203 |
20 |
268 |
1627 |
1894 |
| 3 |
CCACCAATGCATCCATGATA |
60.159 |
20 |
GTGTGACACTGAAACGGTGC |
60.211 |
20 |
266 |
1627 |
1892 |
|
|
