 |
Simple sequence repeat (SSR)
>UN16364
GGGCTGCTAGCTCCTCCTCTCAGCTTCTTTCTTTCGGATCTGGGCAATCGATCCTTGAAGAATTTGAAATCCTTTGCAAATATGATGGCGCGAC
AGAGGAATCATAATCATCGTCGGAAAACGTCTTATTCAACTCTCATCTTCACGGTATTGATTATGTTCACTTTTCTGATTTTGTTCCTTCTCGC
GCTTGGAATCGTCTCGCTGCCCACCAACAATGGCGGGTCCTCCAAAGCCAATGATCTCACTTCCATTGTTCGCAAAAACCTTCAGAGAAGTGGC
AAAGATGTTACGGAGGAGAACGAGCGTTGGGTTGAAATTATCTCTTGGGAACCCAGAGCTTCTATTTACCACAATTTCTTGACCAAGGAGGAAT
GCAAGTATTTAATAGAGCTAGCTAAACCTCATATGGAGAAGTCAACTGTTGTCGATCAAAAGACTGGAAAGAGCACAGATAGCAGGGTGAGAAC
GAGCTCTGGGACATTTCTTCCAAGAGGACGCGACAAAATCATCCGTCAAATCGAGAAAAGGATATCAGATTTTACCTTCATACCTGTTGAGCAT
GGGGAAGGTCTTCAAGTTCTGCACTATGAAATAGGGCAAAAGTACGAGCCTCACTATGACTACTTTATGGATGAGTATAACACTAGGAATGGAG
GGCAGCGAATAGCCACTGTTCTCATGTACCTGTCAGATGTTGAGGAGGGGGGTGAAACAGTGTTTCCTTCAGCCAAGGGAAACTATAGCGCAGT
GCCATGGTGGAATGAGCTGTCAGAGTGCGGGAAAGGAGGGCTCTCCGTGAAACCAAAGATGGGAGATGCATTGCTTTTCTGGAGCATGACACCT
GATGCCACTCTAGACCCATCTAGTCTTCACGGTGGGTGTGCCGTAATCAAAGGGAACAAGTGGTCATCCACAAAATGGTTGCGTGTGCACGAGT
ACAAGGTTTGATCGAATTACTGAGGAGGAAGAAGCAAAAAGAGAGACAGAGAGTGAGAGACGAAGCGTAGGAAAAGGTCAGAAGAATTGGAGCC
CTCTGCTTTCATCCTTGAGATACTTTTGTTATATTTAAGAGTAGATATTTTGTATCTCAAAAAAGACAACCACCATTTGAGTTGATTTTATTTG
ATTAATACCACTACCATTTGATGGGATTATTGATAAAAGTAATGATAAGGAAATTGTGGTCAGCGGAGAGGAGGTTCCTTCCTTCTCTTAATGA
AATTATATTTTTTCTTAAAAGTTATTTTTAGTTTTTATCTTTTTCTTTTTTAGGCAAAATCCCAACCAAAATTCATCTCCTTCGTTTCTTTTCC
ATTTGCTTTGGCTGTCGTTTTTCTTTCTTTGTTTGTTTCTATTTGTTTTCCAGAAGAAGTCAGAAAGAAATATGGATCCGTATCCTCTCTCGCT
CCTCCGTAGGATCAAAGATTGCTTCCATTCGGCCATTTCTTCGCTCCTCGCCAACCTATTCTCCGCTCTCTTCACCTTCGTCTTCGCTCTAGTG
GGGACTTTGCTAGGAGCCTTTACAGGGGCTTTGATCGGCCAAGAAACAGAGAGTGGTTTCATCAGAGGAGCCGCCGTTGGTGCTATTTCTGGTG
CTGTCTTCTCCATCGATGTCCTTGAATCTTCTCTCCTCCTCTGGCAATCCGATCAGTCTGGAATTGCTTGCCTTCTCTACTTGATTGATGTCAT
TGCTAGCCTTTTGAGCGGGAGGCTAGTTCGTGAGCGTATTGGTCCTGCAATGCTAAGTGCGGTTCAGAACCAGATGGGAGCTGTGGAATCACAG
TTCCCCGACCAAACTGACATCTTCGACACTGCTATTTCAAATGGTCTCACTGGGGGATTTTCTCGACAGGATCCCAAAGGTCCGAATCACAGAC
AGCTCAGGGGAGATGGTCTCTTGCTCTGTCTGCCTTCAGGACTTTCAGGTGGGAGAGACTGTTAGAATTTTGCCGCAGTGCCATCATATGTTCC
ACCTACCATGCATCGACAAGTGGCTTTGCAGGCATGCTTCTTGTCCCTTGTGCAGAAGACATCTTTGAATTCCAGACCTCGCTTTCTCTTTCTC
TTCTTTGTAAATGAGTATATAAAGGCTCATACACACACACACACACACACAGAGACTACTAGTGTTCCTTGATTACTTAGGTTACACGTTACAG
GTTATGATGCATCAATCATTGTCACTTGACTGATATCTTTGATTAATTTATGTTACCTCTTCTTTGCC |
Primers for UN16364 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTCTGTCTGCCTTCAGGAC |
60.143 |
20 |
GATGCATCATAACCTGTAACGTG |
59.42 |
23 |
273 |
1903 |
2175 |
| 2 |
TCTTGCTCTGTCTGCCTTCA |
59.855 |
20 |
GATGCATCATAACCTGTAACGTG |
59.42 |
23 |
277 |
1899 |
2175 |
| 3 |
TTGAATTCCAGACCTCGCTT |
59.813 |
20 |
GATGCATCATAACCTGTAACGTG |
59.42 |
23 |
137 |
2039 |
2175 |
|
|
