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Simple sequence repeat (SSR)
>UN16366
GATTGTAAGAGACCATGACGGGAAGCTCTTGCTGTTGTCTAAAGGAGCTGACAATGTAATGTTTGAAAGACTAGCGAAGAACGGTCGTCAGTTC
GAGGCCAAGACCCAAGAACATGTAAACCAATATGCAGATGCAGGTCTAAGAACTTTGATACTTGCATACCGTGAGGTCGATGAGAATGACTACA
TAGAGTTCAACAAGAGTTTCAATGAAGCTAAGGCTTCGGTGAGTGAGGACCGTGAAACTTTAATAGATGAAATCACGGATAAGATGGAACGTGA
CCTCATTCTTCTTGGTGCTACTGCTGTTGAGGACAAACTTCAGAATGGGGTTCCCGAATGTATTGACAAACTTGCTCAAGCTGGAATCAAGATC
TGGGTTCTAACTGGAGATAAAATGGAGACAGCTATCAATATTGGATTTGCTTCTAGTTTACTAAGACAAGAGATGAAACAGATCATCATCAATC
TTGAGACACCACATATCAAATCCCTGGAGAAATCTGGAATCAAGGACGAGATTGAATGGCATCAAGAGAAAGCGTTGTGAAGCAAATAGAAGAA
GGAAAGGCCTTGCTTGCTGCATCAGGTGCAAGCTCTGAAGCATTTGTCTTGATCATAGACGGGAAGTCCCTAACCTACGCCCTAGAGGACGAAG
TCAAGAACACGTTTCTTAATCTTGCTACTGGCTGTGCCTCTGTGATATGCTGCAGATCATCACCTAAACAAAAAGCATTGGTTACACGACTGGT
TAAGACCGGAACTGGAAAAACAACATTAGCGATTGGAGATGGAGCAAATGATGTAGGAATGCTACAAGAAGCTGACATTGGTGTAGGAATAAGT
GGTGTAGAAGGAATGCAAGCAGTGATGTCTAGCGATATCGCCATTGCTCAATTCAGATATCTAGAACGTTTATTACTAGTCCATGGTCATTGGT
GTTACAGCAGAATCTCATCCATTATATGTTACTTCTTCTACAAGAATATAACTTTCGGTGTCACGGTGTTCTTATATGAAGCTTACGCTTCCTT
CTCTGCACAACCTGCATACAACGACTGGTTTCTCTCTCTTTTCAACGTATTTTTCTCTTCTCTCCCTGTCATTGCACTCGGAGTCTTTGATCAA
GACGTCTCAGCTCGCTTCTGTTACAAGTTCCCGTTGCTATACCAAGAAGGTGTGCAAAATATTCTCTTCAGCTGGAAAAGGATCATAGGATGGA
TGTTCAATGGATTCATAAGTGCCCTAGTCATTTTCTTCATCTGCAAGGAATCTCTAAAACACCAGCTATTCGACCCAAACGGCAAAACCGCAGG
CAGGGAAATCCTAGGGGGATTAATGTACACTTGCGTTGTGTGGGTGGTCAATCTCCAAATGGCTTTATCGATAAGTTACTTCACATGGGTCCAA
CACATAGTGATTTGGGGATCAATTGCCTTTTGGTACATCTTCCTCATGATCTATGGAGCTATAACCCCAAGTTTCTCTACCGATGCTTACATGG
TCTTCCTTGAAGCCCTGGCTCCTGCTCCTTCCTACTGGCTCACCACTCTCTTTGTGATGATATTTGCTTTGACACCTTACTTCGTCTACAAGTC
AGTGCAGATGAGGTTTTTCCCTAAATACCATCAAATGATTCAGTGGATTAGGTACGAGGGTCACTCTAATGATCCTGAGTTCGTTGAGATGGTG
AGGCAGAGGTCGATTAGACCCACCACCGTTGGATACACGGCGAGAAGAGCTGCCAGTGTACGGCGCTCCGGTAGGTTTCACGATCAGCTCCATA
AGGATCTTGTTGCTTTCTGAAGAGTATAGTAGTGATTGGATGTAAATATATATATATGTACATCTCTAATGTAGAAACTAGGGCTTCTTTTATT
AAGATTCCTTGTCAGAGAAGGCATCTGTAGTTCATTTCACACACGGAAATATTTGTACATAAACTTTTCATCTCTAGTGTAGAGATCAATGTTT
TTGTCTGATTGTATTTATCCTTCATTGAATAATATTGTATAATAACTTCAGACGTGG |
Primers for UN16366 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTTTCACGATCAGCTCCAT |
60.081 |
20 |
TTTCCGTGTGTGAAATGAACT |
58.118 |
21 |
164 |
1766 |
1929 |
| 2 |
GAGGTCGATTAGACCCACCA |
59.927 |
20 |
TCCGTGTGTGAAATGAACTACA |
59.097 |
22 |
230 |
1698 |
1927 |
| 3 |
GGTTTCACGATCAGCTCCAT |
60.081 |
20 |
TCCGTGTGTGAAATGAACTACA |
59.097 |
22 |
162 |
1766 |
1927 |
|
|
