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Simple sequence repeat (SSR)
>UN01677
TCACCTTTTGAGAACATCTTCTTCTTCATTCTCTCTTTTTACAGTTCACATCACTCTCATTAATCACTCCAACAAGAACAGAGTTCTAAATCTC
CTAGAAAGTTTCAGTTTTTTTATTTATTTATTCTGGAGAAAACAGAACAAAAACATGAGAAAGACATCTGTTTCTTCTTCTCCTAACAGCTTCG
GTGGGTTCCTAAGCCCCGGAGCTCCGAGCTATACCGATAACAACAACAAAGGATGGAGCTCCGAGAGAGTTCCACATCCTTCCTCTTCTTCCAC
CACCGCCGGAACCAACAGTGTTCATCATCACCGTCGTCGGATCGGCTCTGCCTCAGCTTTGACGACGCCGTTTTACAGCGGCAGATCGATACCA
TCGAAATGGGAAGATGCTGAGCGGTGGATTTGCAGCCCCGCGGTGACGAACCCTCACTTCTCCCATCATCAGCAGAGACGGCAGAAGTCCAAGA
GCGGTCCCATTGTTCCACCTCCTCCTCATCCCACGCTGACGCATCAGAGGATGATGATGATGATGAATCGGGCGGTGGAAGCTCCTCCTCAGGG
GAGTTTGAAGAAGGGTTTGATGACGGTTGGCTCGCCGTTCTCGACGGGTGTTTTGGAGGCGGAGAGGGTGTTCAGAGGGAGTGTCGGTGGTGGT
GGTGGACATGGACATAGCCAGAGCTGTGCTGATTTGATGAGTGAAGAAGAAACTTCATCATCTCTCAGCTCCAAAACTGATACTGAGGAGAAAG
CAGAGGACACAAGGGTGGTTTCAAGAAGAGATATAGCTACTCAGATGACTCCTAATAATAATCATCACTCTCCTCCTCAAGAGCTATCTCCACC
GCTGGTTGTTTCTGTGATTGAGCCTCCTCTTCCTTGTAGAGGTGGTGAAGTGAGAGAAGTGAAGGTTGATAAAGGAGCAAGGTTGATTAAGCGT
CCCAACAGAAGAGTCATGTCATCTTCTTCTTCTTCTTCTTCTAGGATTATCAGGAGAGATCATCAACCTGAGGTTCAAGACAACTCTTCTTCAT
GGGATATCTCAGAACCAGCCATGACTCTTTTTAAGTTGCATAGAGAGGAAGCGAAGATAGCAGCTTGGGAAAATCTACAGAAGGCTAAAGCAGA
AGCCGCCATGAGAAAGCTAGAGGTGAAGCTGGAGAAGAAGAAATCAGCATCAATGGATAAGATCTTGAACAAGCTTCAACAGCAAAGCTGAAGC
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Primers for UN01677 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCGAAATGGGAAGATGCTG |
60.036 |
20 |
CACTCCCTCTGAACACCCTC |
59.682 |
20 |
272 |
376 |
647 |
| 2 |
CATCGAAATGGGAAGATGCT |
60.036 |
20 |
CACTCCCTCTGAACACCCTC |
59.682 |
20 |
273 |
375 |
647 |
| 3 |
TGTTCCACCTCCTCCTCATC |
60.048 |
20 |
CACTCCCTCTGAACACCCTC |
59.682 |
20 |
167 |
481 |
647 |
|
|
