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Simple sequence repeat (SSR)
>UN01677
TCACCTTTTGAGAACATCTTCTTCTTCATTCTCTCTTTTTACAGTTCACATCACTCTCATTAATCACTCCAACAAGAACAGAGTTCTAAATCTC
CTAGAAAGTTTCAGTTTTTTTATTTATTTATTCTGGAGAAAACAGAACAAAAACATGAGAAAGACATCTGTTTCTTCTTCTCCTAACAGCTTCG
GTGGGTTCCTAAGCCCCGGAGCTCCGAGCTATACCGATAACAACAACAAAGGATGGAGCTCCGAGAGAGTTCCACATCCTTCCTCTTCTTCCAC
CACCGCCGGAACCAACAGTGTTCATCATCACCGTCGTCGGATCGGCTCTGCCTCAGCTTTGACGACGCCGTTTTACAGCGGCAGATCGATACCA
TCGAAATGGGAAGATGCTGAGCGGTGGATTTGCAGCCCCGCGGTGACGAACCCTCACTTCTCCCATCATCAGCAGAGACGGCAGAAGTCCAAGA
GCGGTCCCATTGTTCCACCTCCTCCTCATCCCACGCTGACGCATCAGAGGATGATGATGATGATGAATCGGGCGGTGGAAGCTCCTCCTCAGGG
GAGTTTGAAGAAGGGTTTGATGACGGTTGGCTCGCCGTTCTCGACGGGTGTTTTGGAGGCGGAGAGGGTGTTCAGAGGGAGTGTCGGTGGTGGT
GGTGGACATGGACATAGCCAGAGCTGTGCTGATTTGATGAGTGAAGAAGAAACTTCATCATCTCTCAGCTCCAAAACTGATACTGAGGAGAAAG
CAGAGGACACAAGGGTGGTTTCAAGAAGAGATATAGCTACTCAGATGACTCCTAATAATAATCATCACTCTCCTCCTCAAGAGCTATCTCCACC
GCTGGTTGTTTCTGTGATTGAGCCTCCTCTTCCTTGTAGAGGTGGTGAAGTGAGAGAAGTGAAGGTTGATAAAGGAGCAAGGTTGATTAAGCGT
CCCAACAGAAGAGTCATGTCATCTTCTTCTTCTTCTTCTTCTAGGATTATCAGGAGAGATCATCAACCTGAGGTTCAAGACAACTCTTCTTCAT
GGGATATCTCAGAACCAGCCATGACTCTTTTTAAGTTGCATAGAGAGGAAGCGAAGATAGCAGCTTGGGAAAATCTACAGAAGGCTAAAGCAGA
AGCCGCCATGAGAAAGCTAGAGGTGAAGCTGGAGAAGAAGAAATCAGCATCAATGGATAAGATCTTGAACAAGCTTCAACAGCAAAGCTGAAGC
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Primers for UN01677 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGAGCAAGGTTGATTAAGCG |
59.845 |
20 |
CTCTAGCTTTCTCATGGCGG |
60.11 |
20 |
231 |
920 |
1150 |
| 2 |
GGAGCAAGGTTGATTAAGCG |
59.845 |
20 |
CCTCTAGCTTTCTCATGGCG |
60.11 |
20 |
232 |
920 |
1151 |
| 3 |
CTATCTCCACCGCTGGTTGT |
60.134 |
20 |
CCAAGCTGCTATCTTCGCTT |
59.752 |
20 |
267 |
836 |
1102 |
|
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