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Simple sequence repeat (SSR)
>UN16409
GAGATAATATACTGACTTAATGCAACTAATTAAAAACAAACCATAATGTCACAACAGAAATTTAACCGTACGTTATAACAAAAACCATCTAAAA
AATTGTCTGAATAAACGATACTTCAGTTTTTAAACAGGAGAGACAAAAAAAACATAACACCTAGTAATCTCTCTCTCTCATTGATCACTCTTCA
TCAGGCTTCTTGAAGACATAAGTGGTTCCACACTTGCCACAGTAATGCCTATCGAAATGACTCGCCATGAACGTCCCCGGACCACAGCTCGCCG
AAGGACACTCTTTCCTCAGCCTCTGAACCTTGCCGCTTCCATCGACCTTGTAAAACTGCAGAACCGCGAGCTTCACTTTCTTGTGCTTGTGCTT
GATCTTCTTCGGCTTCGTGTACGTCTTCTTCTTCCTCTTCTTCGCTCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATG
TTGTAATCCGCGAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCT
TGGCCTTCACGTTGTCTATCGTGTCGGATGATTCGACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATTTGCATTTTCTTGTG
AGTGCTCTCTCTGTTTTTTTTTTTTTTTTTTGGGTCGCC |
Primers for UN16409 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGTCACAACAGAAATTTAACCG |
57.748 |
22 |
CGATAGGCATTACTGTGGCA |
59.712 |
20 |
196 |
47 |
242 |
2 |
TGTCACAACAGAAATTTAACCGT |
58.599 |
23 |
CGATAGGCATTACTGTGGCA |
59.712 |
20 |
196 |
47 |
242 |
3 |
TGTCACAACAGAAATTTAACCG |
57.748 |
22 |
CAAGGTTCAGAGGCTGAGGA |
60.523 |
20 |
268 |
47 |
314 |
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