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Simple sequence repeat (SSR)
>UN16413
GGGAACACATTATTATTACACACTCATCTAGAGAGAGAAAAGAGACGTCTGGAGATGGAAGGCAAAGAAGAAGATGTTAGAGTCGGAGCCAACA
AGTTTCCGGAGAGACAACCGATCGGAACATCGGCTCAGAGCGACAAGGACTACAAGGAGCCACCTCCTGCGCCCTTGTTCGAGCCCGGCGAGCT
TGCTTCGTGGTCCTTCTGGAGAGCCGGGATCGCTGAGTTCATCGCCACGTTCTTGTTCCTTTACATCACTGTTTTAACCGTCATGGGAGTCAAG
AGGTCACCGAACATGTGTGCTTCTGTCGGAATCCAAGGGATCGCTTGGGCTTTCGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCTGGTA
TCTCTGGTGGACACATCAACCCAGCTGTCACGTTCGGTCTGTTCTTGGCCAGGAAGCTTTCGCTCACACGAGCTGTGTACTACATAGTGATGCA
GTGCTTAGGAGCCATCTGTGGAGCTGGTGTGGTCAAGGGATTCCAACCAAAGCAGTACCAAGCTCTAGGAGGTGGAGCCAACACTGTAGCTCCT
GGTTACACTAAAGGAAGTGGTCTCGGAGCTGAGATTATTGGAACTTTTGTCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAGAGGAACG
CTCGTGACTCTCATGTTCCCATTCTTGCACCTCTCCCTATCGGATTCGCTGTGTTCTTGGTCCACTTAGCAACCATCCCCATCACTGGTACTGG
CATCAACCCAGCAAGGAGTCTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGGGACGACCATTGGGTGTTTTGGGTTGGACCATTCATC
GGTGCTGCACTTGCTGCTCTTTACCACGTGATTGTCATCAGAGCCATCCCATTCAGTCCAGAAGCTGATTGAGTTACTCTTAGTTTGCTTTTCT
TTTGTGAATGTACTACTACTACTACTACTACTACTTGTGTGAAACATCGTGCATGTGTTTGTTCCT |
Primers for UN16413 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTTGGGTTGGACCATTCAT |
60.029 |
20 |
AGGAACAAACACATGCACGA |
60.16 |
20 |
181 |
826 |
1006 |
| 2 |
ATCAGAGCCATCCCATTCAG |
60.034 |
20 |
AGGAACAAACACATGCACGA |
60.16 |
20 |
124 |
883 |
1006 |
| 3 |
AACCATCCCCATCACTGGTA |
60.05 |
20 |
AGGAACAAACACATGCACGA |
60.16 |
20 |
278 |
729 |
1006 |
|
|
