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Simple sequence repeat (SSR)
>UN16449
GGGAAAAATCCTGTTCGTCCATTTCAGTGGTTCTGCTGCTTCCTTCGTATAAGATGCCACATGATATCGGATTGACTAGTGATCCAAATCTTAT
GTCAGACACACAATTGTAATCTGCTTTCGCAAATATTTTTACAATTTTTTTTTTTTTTTAAAGTCGCACACTTTAGAGTTTCAATACAAATCAA
TTAGCTCTCTCCTCTCCCTACTACTATTGTTCTTGCTTCTAGCTGCGGAAAGTGAGACTCTTCTTGAAAGGTTGAAAGTGAGGGTGGGATTGCT
TTTTAAAGTGTGAAGAAGAAGAAGAAGATCAAAAAATGGCTTTGGAGTACGAGTCTCTGAATGAAAACGTGAAGAAGAAGAAGAAGAAGAAGAG
ATATACAAGGTTGCATCAATCGCCCTGAGTCCGAATGTCTCTGCGCAGATCTTTATGGGTTTGATGGTTAGTCCTCCAAAGCCTGGAGACATTT
CATATGACCAGTTCGCCCGTGAAAGCAAGGGGATTCTTGAATCTTTGAGAAGAAGAGCAAGGATCATGACTGATGGATTCAACAGCTGCAAAAA
CGTTGTCTGCAATTTCACAGAAGGTGCGATGTATTCGTTTCCTCAAATACGGTTACCTCCGGGTGCTCTCCAAGCTGCTAAACAAGCAGGAAAA
GTGCCAGATGTTTTCTACTGTTTGAAGCTCTTAGAAGCCACAGGAATCTCCACAGTGCCTGGCTCTGGTTTTGGACAGAAAGAAGGTGTGTTCC
TTCTGAGGACAACGATCTTGCCTGCGGAAGAAGAGATGCCAGAGATCATGGACAGTTTCAAGAAGTTCAACGACGAGTTCATGACTCAGTATGA
GAATAGCTTTGGTTATTCCAGAATGTGATTTACTTCTCTCTTCTTGTTATGATGATGATGGAACCACTATTGTGTTCTTCTGCTACACTCTTTT
AAAAAGCTAAATCTCCGTAGTACTCTCTTTCTTCTCTATCTTATATAAACTCTCTCTCTTTACTTCCC |
Primers for UN16449 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTTCTAGCTGCGGAAAGTG |
60.292 |
20 |
TCCAGGCTTTGGAGGACTAA |
59.807 |
20 |
241 |
223 |
463 |
2 |
GTTCTTGCTTCTAGCTGCGG |
60.292 |
20 |
TCCAGGCTTTGGAGGACTAA |
59.807 |
20 |
247 |
217 |
463 |
3 |
TGCTTCTAGCTGCGGAAAGT |
60.292 |
20 |
TCCAGGCTTTGGAGGACTAA |
59.807 |
20 |
242 |
222 |
463 |
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