 |
Simple sequence repeat (SSR)
>UN16500
GGAATTTTGACCAATAAACTGAGATTATTCTCCGTCTCTCTCACCTCTTTTCTCGGACTCATCATCCTCGGCTTCGACTCGATACTCATTTTTC
TCCGATTTAGGGATTCCATACTCGCCATGTATCGCACGGCAGCTTCACGAGCCAGGTCTCTCAAGGGATCTCTTAGCCGAGGTTTGGGACCTGC
GGCGCGTTATGCAAGCTCTAGTGCTGTTGCTACGACCTCTTCTTCTTCTTCTTCTTCTCCAGGTTTCTTAGGCTGGTTGACTGGTGGATCCTCT
GGCTCCCTTGCTTCACTGGACATGCCACTACAGGGCGTTTCTCTTCCTCCCCCGCTTCCTGACCGCGTCGAGCCAAGCAAACTCAAGATCACTA
CTCTTCCTAATGGCCTCAAAATCGCCTCAGAGATGTCTCCCAATCCGGCAGCTTCTATTGGTTTGTATGTTGATTGTGGTTCGATCTATGAGGC
TCCTTATTTCCATGGAGCAACGCATTTGCTTGAAAGGATGGCTTTCAAGAGCACGACGAACAGAAGCCATCTACGTCTTGTCAGGGAGATAGAA
GCGATTGGAGGGAACACCTCTGCATCTGCGTCTCGGGAGCAGATGAGTTACACTATTGATGCTCTTAAAACCTATGTCCCTGAAATGGTTGAGG
TTCTTATTGACAGTGTGAGGAACCCTGCTTTCTTGGACTGGGAAGTCAATGAAGAGCTACGTAAAATGAAGGTGGAGATAGCGGAACTTGCGAA
GAACCCTATGGGGTTTCTCATGGAGGCTGTTCATTCTGCTGGTTATTCCGGTGCATTGGCTAATCCTCTGTACGCACCTGAGTCTGCTTTGCAC
AGATTGAATGGGGAACTCTTGGAAGAGTTTATGACTGAGAATTTCACTGCTGCACGTATGGTGTTGGCGGCAAGTGGAGTTGAGCATGAAGATC
TTTTGAAAGTTGTTGAGCCATTTAACTTCTGACCTTCCTAATGTCCCACGCCAAGCTGAGCCAAAATCTCAGTATACTGGTGGAGATTTTCGGC
AACATACTGGTGGAGAGGCTACACACTTTGCGCTTGCCTTTGAGGTTCCCGGCTGGAAGAACGAGAAAGAAGCACTCATCGCCTCTGTTCTCCA
GATGCTTATGGGAGGAGGTGGCTCCTTCTCAGCTGGAGGCCCTGGAAAAGGAATGCACTCATGGCTATATCTCCGTATTCTGAACGAATATCAG
CAAGTTCAGTCATGCACCGCATTCACTAGCATCTTTGACAACACTGGACTGTTTGGAATCTATGGTTGCTCGAGTCCTGAGTTTGCTGCAAAAG
CAATTGAATTAGCAGCTAAAGAGCTGAAAGATGTAGCAGGAGGAAAAGTTAACCAGAAGCATCTAGATCGCGCCAAGGCAGCCACAAAATCTGC
AGTTCTGATGAATTTGGAATCTCGGATGATTGCAGCAGAAGACATTGGCAGGCAGATACTTACATACGGAGAGAGGAAACCAGTTGAGCAGTTC
TTGAAGACAGTAGACGAACTTACGTTGAAAGACATTACAGATTTCACCAGCAAGATTATTTCAAAGCCTTTGACAATGGGTTCCTTTGGAGATG
TGTTGTCTGTTCCGAGTTACGACACCGTAAGCAGCAAGTTTTGTTGAAGCAGGAAAATATTTGCTAGACAAATCAACAATGTTTTGAGACTTGT
AAAATAAATCTTTTGGGGAGAAGAGAAGAAGACCCAACCAAATTTTATTATTTTTATTTAAATGGAATTTTGTATTCCAATAAATATTTTCTTA
CTACATTAACACTAAGTAACACAGTCACAGTGGTTCTGTGATGACATTTTTATGCTGTTTCGAATTTCCAAATGAGCCTGGTTTGGTTAAGTGT
CGTCATACCTTTTTATCG |
Primers for UN16500 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCAAGGGATCTCTTAGCCGA |
59.91 |
20 |
CGATTTTGAGGCCATTAGGA |
60.031 |
20 |
246 |
155 |
400 |
| 2 |
TCAAGGGATCTCTTAGCCGA |
59.91 |
20 |
AGGATCCACCAGTCAACCAG |
59.962 |
20 |
126 |
155 |
280 |
| 3 |
CTTCACGAGCCAGGTCTCTC |
60.135 |
20 |
CGATTTTGAGGCCATTAGGA |
60.031 |
20 |
264 |
137 |
400 |
|
|
