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Simple sequence repeat (SSR)
>UN16515
GGGAGAAAAGCCAATGCAAGAGGAAGGAGAAGAAAGCTAAACCTCTCTCTCTATCTCTGTTCATGGCGCTTTCAGGAACTTTGCAGCTTACTTC
TAATTACATTCCTGGTTATGGAGTTTCAGAGAGCAGGAGCTTCTCTAACTCTGTTGTGTCTAGAAAATCACTTGATGTATTACCTTTCTCTTCC
TGTCTGGTTCGCATCGAGAATGGAGGATATGCCGCCCCTAAGAGAATTTCATTTGTGTGCGGAGCAAGTTCTTCTGGCCATAGGAGAAACAATC
CTGATTTCTCAAGAAACAATAGGAATGGTTTCAGAGGTAATAGGAATAGGAGGAACGAAGATAGAGACGGTTTAGACGGTGGTGGTGGTGGTCT
TGAAGACTCTGAGATGCTGTCTTCCAAGAGCGGTCCTGTGTTCTCTCTATCTAGTTCCCCGAAGTTCCAGGCGACTTCATCACCTGGACCAAGA
GAGAAAGAGATAGTTGATCTTTTCAGGAAAGTCCAAGCTCAGCTCCGAGCTCGAGCTGCTGCTAAGAAAGAAGATAAGAAGACTGAAGAAGCTT
CTAAAGGACAGGGAGGCAAAGAGACTGAGACTGTGGACTCTCTTCTTAAGTTACTGAGGAAGCACTCAGGAGAACAGAGCAAGAAGAACGTTAG
CAACTTTGATTCTGAAAAGCAGCTACAAGGAGATGATGATGATGATGATGATGCTGAAAGACAGGTTCACAGTTCCAATCATTTTGATTCGCGA
AACAGGGATCATAATGCAACACGTTTTACAAGGCCAGCCTCAAGCTTCAGGCGCAATTCACCTGTACCGAGACATAAACCTCAGTCCAGTTACT
CTAGTGAGGCCATTTTCGATGAGGCGTCAAGTTACAGTGTGACTTGGACTCAGAAAAAGGATCAAGTAGATTCACGTGATGAACCTGAATACGA
GCCCGAGCCTGTTTATGAACCTGAATCTGAACCAGGACTTGGCCTTCTCGAATCAGAGCCAGAGCTAAAACCAGAGTCATTTTACCATGAGGAG
GATGAGGATCATGATGTCATTGTAGATGAATTAGCAGTTGATGATGAGTCTATCAATGCTGAGGAAGAAACTGAGAAAGATGAAGACTTGAGTG
CACTGAAGTTGATAGAACTTAGAGCCATAGCAAAATCAAGGGGTCTTAAAGGGATTTCAAAGATGAAGAAAGCAGAGCTGTTGAATTTGCTGTG
TAGTAATAAAGCATGATGATAGGAATGAACAAGAACACTGTTTTAGTTTTTCTGATACAGCAAATGAATCTCCAAATATTTGTTTCATTCATAA
TTTTAGTGCATTCTGACC |
Primers for UN16515 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAATTTCATTTGTGTGCGGA |
59.523 |
20 |
TGGAACTTCGGGGAACTAGA |
59.665 |
20 |
214 |
232 |
445 |
2 |
ATTTGTGTGCGGAGCAAGTT |
60.699 |
20 |
GCTGAGCTTGGACTTTCCTG |
60.134 |
20 |
275 |
239 |
513 |
3 |
GTCTGGTTCGCATCGAGAAT |
60.226 |
20 |
GTGATGAAGTCGCCTGGAAC |
60.667 |
20 |
270 |
190 |
459 |
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