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Simple sequence repeat (SSR)
>UN16534
GGACTATCACATTGTCTCTTCTCTCCTCCCAATCACACTACACTACACATCATGGCTTTCGCCACTAGAAGCTCTCTCTTCGTCTGCTTCACAA
CACTTGTTCTTCTCTCCACTCAAATCAATGCAAGAGAGAGCTACTTCTTTGGAAAATTCCACCGAGAATCCCCCAAAGACCAAAACACTAACAA
TGTCCTCCCTCTCGAGACTAGCGAGAAAACCACAGTAGAAGAATCTTTTCCCAACAAGAAAGAGCAAGAGCAAGATCCTACCTTTGTCCCTGAG
TCCGAAAACGGCTATGGCTTATATGGTCATGAGACCACCTACAACAACAAGAAAGAAGAGTTCAACAACAACAACAACAAGTACGATGAAAAAT
TCAACGGTGAGACTTTCTCAACTCCAAGCTTGAGCGAGACCGAAGAGCCTTACAACAACTACGAGGAGAACTACCCGAAGAAGACCGAGAGCTA
CGACAACAACCGTTACAACAACGAAGAGTTCAACAACAAGTACGATGAAAACGTCAAGGAAGAGTTCAACAACAACAACAAGTACGATGAAAAC
TTCAAGGAAGAGTTCAACAACAACAAGTACGATGAAAACTTCAAGGAAGGGTCATTCTCTGAGAACAATGAAGACAAGAGAGGTATCTACAACT
CCCACGCTTACGGAACGGAGCTAGAGCGTGAAACGCCTTACAAAGGTTACAGCCACAACTTGGAGAGACAAGGCATGAGCGACACAAAGGTTCA
TGGA |
Primers for UN16534 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGAAGAAGACCGAGAGCTA |
59.711 |
20 |
TCTAGCTCCGTTCCGTAAGC |
59.615 |
20 |
233 |
451 |
683 |
2 |
CGAGGAGAACTACCCGAAGA |
59.425 |
20 |
TTTCACGCTCTAGCTCCGTT |
60.154 |
20 |
254 |
438 |
691 |
3 |
TACCCGAAGAAGACCGAGAG |
59.425 |
20 |
TTTCACGCTCTAGCTCCGTT |
60.154 |
20 |
244 |
448 |
691 |
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