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Simple sequence repeat (SSR)
>UN16560
TTTTAGAACTAAAGTGAGGGACAAGACTGTATACTAAAAGCATAACTTATACTACATAGAATAATAGAACTAAAGTGACATGTTTGTCAACATA
AATACCAAAATAAATAAGTTTGCAACATTTAAGTACCCAAAAGCATTAAAACCATAACAGAGAGAGTTCATCATATTTAAGCTGAGAGTTTGAT
CTTCTTGGCTGCTGGCTCATCTTCTGAAACATGAACCTCAGATTCTTCTTCCTCCTCCTCTTCTTCGTCTTCTTCCTCTTCCTCTTCTTCTTCT
TCTTGATCTTCTTCTTCTTCAGCGGAATTTTCAGACTTTACTTCATCTTCTCGCTCCTCCAGCTCTTTCTTCTTCTTCACCTCCTCTATCACAT
CCATCAATTCCCTATTCACCTGTGGGTTCTGAAGGAAGTCAGAAATGTCATTTGGGCAGCAAGGACACTTCATGACGTTCTTCTGTGCACGTAG
AGTGCGCCCACCTCTGCTTCTCTGCCTCACTTGAGTTATCCCAGCAAATTTACCAGTTAGGCATTCCTTGCAGAAGTTGTGAGCGCAAGGCGTT
GTCACTGGAGAGCTCATGACTTCCCGACAGATTTGGCAACCAAATTCTTTGAGAAATTTGTCCCTATTGTTTCCTGCC |
Primers for UN16560 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCTGGCTCATCTTCTGAAA |
59.673 |
20 |
TCATGAAGTGTCCTTGCTGC |
59.992 |
20 |
254 |
198 |
451 |
2 |
TGCTGGCTCATCTTCTGAAA |
59.673 |
20 |
CGTGCACAGAAGAACGTCAT |
59.905 |
20 |
270 |
198 |
467 |
3 |
TGCTGGCTCATCTTCTGAAA |
59.673 |
20 |
CTTCCTTCAGAACCCACAGG |
59.691 |
20 |
217 |
198 |
414 |
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