Simple sequence repeat (SSR)
>UN16564
CAGAAGTATCAGAAACATCCAGGAGGGAGAGCAGAGAGCGCATATGCGTCGTCTGGACACAGGAGTGCAGAAGAACAGATCCCAGCAAGCACTA
GCTTTGTGAAGCTCTCGGATATGAGTGAAGAGGAGTGGACTGTGTTCCTGGAGAAGTATCAAGAGCTGCTTTATCCTGCATTTGCTAAGCGTAA
GGCCATAACTTTAGGACAGAATCTGAGGCAGAGGATGGGAACTTCGTGCCAGTTTTGATGATGTCAGAGACTGAAGAAGAAGAAGAATAAAGGA
TCGTGTAGAGGTCTTGTTGCTAAGGGCTCTTGCTTGAGACTAGACTTGGTGGAAAAAGATGGTCAGGAGTGGTAGTGGATTTAGTGTAAATATC
CGTTAATCTTCTTAAGCCCTCTCTAGGTTCTTGTTGGTTTCTGCTGTCTCGTTTAGAGCCATGTGTAGCCCCCTCTTATGTTTTATAAGTCACT
CGTAGATTAGAAAAATAAAATGGGATATAAAGCTTTGTTTCATACC |
Primers for UN16564 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATTTGCTAAGCGTAAGGCCA |
59.875 |
20 |
CGAGACAGCAGAAACCAACA |
60.025 |
20 |
254 |
174 |
427 |
| 2 |
ATCCTGCATTTGCTAAGCGT |
59.873 |
20 |
CGAGACAGCAGAAACCAACA |
60.025 |
20 |
261 |
167 |
427 |
| 3 |
TGGACACAGGAGTGCAGAAG |
60.022 |
20 |
AGCAAGAGCCCTTAGCAACA |
60.154 |
20 |
263 |
54 |
316 |
|
|
