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Simple sequence repeat (SSR)
>UN16640
GGAATGGCTCTTCTTCGTCTCCCTCCCATTTCCCTCCAATTTCTAGGTCACCAATCTGAACACAAAACCCCTAATCCCGGCGTTTCGCTCACCA
ATTTCTCCCTCCCTTGGTCTACTCCTCCTTCACTATCTCGTCTCCATCTATCAAAACCCAGAAATCTTACCTCCTGCTTCTCCGCTACTACCCA
AGAGCCAATCCTCGAGTCTTCTTCTTCTTCTTCTGAAGAGATTTCGAAAACCAGATTGATTGCTCAAAACGTTCCTTGGACCTCTACACCCGAA
GACATAAGGTCGCTGTTCGAGAAACACGGCAATGTCGTCGACGTTGAGATGTCTATGCACAAGAAGGAAAGGAACCGAGGTTTGGTTTTCATTG
AGATGGCTTCTCCTGAAGATGCTGCATCAGCTCTTCAAGCTCTCGAATCCTATGAATATGAGGGTCGTCGTTTGAAGGTAGCCTATGCAAAGGC
CAAAAAGAAGAAAACTTATGCTCCTCGTGAGAAGCCTACGCCGGTGCCTACCTTCAATTTGTTTGTTGCAAACTTGGCGTTTGAAGCAAGGGCC
AAGCATCTTAAGGAGTTCTTTGATGCAGACACTGGTAACGTTGTCTCCACTGAAGTTATATTCCATGAAAATCCTAGGAGGTCGAGTGGTTACG
GCTTTGTCTCTTTCAAAACCAAGAAAATGGCCGATGCTGCGCTCCTTGAGTTCCAAGGAAAGGATTTCATGGGAAGACCAATCCGATTAGCTCG
TAGCAAACAGTTTGTGAAGTTGCAAGCAAAAGAAGGGTTGCAGCCACCTGATGAAGAGGAACTATCTGAGTCTGAGACAATGACCCAAGAGGAC
GAAATTCCAGCTCCGGAAAACTGAGAAGGATTAGTGGTGGTTGGGTATCGGAATTGAAGAGAAAGCTTTGAGATTTTGACAAACAAGAGAAGCG
GATACATTGCAATTACCAACCTTAAGTAAGTGGTGGAGAAGTAAGAAGTACAGGAACGATCTAGTTAGAACTGAAAACTACTAGCGACTGTCAA
GAAACAAAACCCATGTGTCTCTAAGAACTTGCTTTGTTAAGTTAACACAATGTTCTTATTTTTCTATTGGTTTTGATAGAAAATTTTGCATTTG
TTACTATGTTGAATGTGTATTTATTTGGTTCCCAAAGAGCCCCACTTAC |
Primers for UN16640 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TACCTCCTGCTTCTCCGCTA |
60.11 |
20 |
CTTCGGGTGTAGAGGTCCAA |
60.103 |
20 |
122 |
162 |
283 |
| 2 |
TACCTCCTGCTTCTCCGCTA |
60.11 |
20 |
TTCGGGTGTAGAGGTCCAAG |
60.103 |
20 |
121 |
162 |
282 |
| 3 |
CCCATTTCCCTCCAATTTCT |
60.124 |
20 |
CTTCGGGTGTAGAGGTCCAA |
60.103 |
20 |
259 |
25 |
283 |
|
|
