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Simple sequence repeat (SSR)
>UN16646
AGGATAAAAAAATGGCGTTGAACGTGGTATCATCATCTGCGCGTGTATCTTCAGCCACGTCTTTGACCTCGTCCACGATCAAAAAAGCCTTGGT
TACACCTCGATTTGCTTCCTCTCTCCCGAATCTCAGCCTCCTTCGTCGAGGTTTTCGTCGTATAACAGCAATGGGTTCTTCAGCTCCCGGATCG
GTTAACAAGGCAGAGGAAGAGTGGCGTGCGATTCTATCTCCTGAGCAATTCAGGATCCTCAGGCAGAAAGGCACTGAATATCCAGGGACAGGAA
AATACAACAAAGTATTCGCAGACGGGATCTATAGCTGCGCAGGATGTGGGACTCCTCTATACAAATCCGCCACCAAGTTCGACTCTGGCTGTGG
CTGGCCTGCTTTCTTTGACGGCCTCCCAGGGGCCATTAACCGAACCGCGGATCCAGACGGGAGAGGAATCGAGATCACTTGTGCGGCTTGTGGA
GGACATCTCGGACATGTTTTCAAAGGAGAAGGTTTCCCTACTCCTACCGATGAGCGACACTGTGTCAACAGTGTCTCCCTCAAGTTCGCACCGG
GGGATGCAACCTTGTGATAATAATAATAATAATGTATACTTGTGATGTGTGAAACTTCGCTGGCTCGCATTTTGTTTTGTCTTTGCTCTGTGAA
ACTAGTGTGACTGCTAGTAGTAATAAGGTCG |
Primers for UN16646 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCTACTCCTACCGATGAGCG |
59.853 |
20 |
GACAAAACAAAATGCGAGCC |
60.626 |
20 |
139 |
507 |
645 |
2 |
GATCCAGACGGGAGAGGAAT |
60.421 |
20 |
GACAAAACAAAATGCGAGCC |
60.626 |
20 |
220 |
426 |
645 |
3 |
ATCCAGACGGGAGAGGAATC |
60.421 |
20 |
GACAAAACAAAATGCGAGCC |
60.626 |
20 |
219 |
427 |
645 |
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