 |
Simple sequence repeat (SSR)
>UN16686
CCGCAATTACCATTTTTTCCTAGTGAATCATCAAAAGAAGACCAATACATAAAGCTTACAATGTCATTACAGAGAGTAAAACATATATAAATTC
GAGTACGGAAATTTTCTCAGAGACAAACCGAACTAAACCAAAACAAAACCCGAATTAAGACCTTCGAGTTGCTGATGAACCGGGTTCTCGCATC
TCCCACGCCGGTTTACTCTCTCTGGAGACATCCGACTTGATTGCTCGAACCAATGGCTTCATGACTAGCAGGTATTGGAATGCAAAGATTAATG
GGATTAGTCTTTTTCCTCTTGCGTTTGGGTTTGGCCCTTCCACCAGTTTCTTGTCAACGTGGATCGACTTGTTGCCATTAAAAGAGATCTCTGT
GATTGTCTTGTACAGATTCGTAATCCAACTACTTCCGTCTGGAAGAATCTTTTCATCGCTTTCATTCTTATGACATCTCCCGCTGTTCTCAACA
AGAATAACAGGAAGAGATGAATCCTGCATATCCTGTTTCTTCAGTTGAGCGCTAGCATAGATCAGTTTCAGAAGAGCGTCGGATCTTCTGGAGA
CAAAGAGATCATAGTTTAACCCGTCCGGGGGAGAGAACTGAGCATGACTGAGGACAAGAGCAGACTTCTTCCATATCTCTTTACCAAATGCATC
GGTTATAGCCGTCACCACCTGCTTATCCAAGTCATCCACCCGATACACATCCAAACGATCTACGTATAGTAGCACATCTATAGTCTTGTTCAGG
AGAAATCCTTTTATAAGGTTGACGGCTTGATCATTCACATATCCTCCCTCAATAAGACCAGGAGTGTCGATTATGTTTAATGTAAAACCCGACC
TTGAGCGAGAGACCAAGGAAGGTCTCAGTCCTTCAGACTGGAAAGTACTGACTGCAGCAGCTCTCTCGCCCATAACTGAATTCACAGTAGAAGA
CTTTCCAACACCTCCTTTCCCCATCACAAGTACTGTTAGCGAGCTCACATCCTCTTCTTTGAACTTGCCAAGGATCTCGAGCAACTTAGATTGA
GTAGCAGGTGGGAACTGTTGAATACCGATCCATTCACGAGACATTTGCAAAGCTGCCATGAACACAAATCCTTGTCTTTCGAAGTAAAAACTGG
AGATAGCGACGCCAGAAAAAAAGAGAAAGAGACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATCTGAGAGAGAGGAGAGGGGAT
TGATATTTGCTGTAACGGAATCGAAAAAGTATAAAGGTGAAAGAGGTAGAAGGAAGCTCTGGATATCCGTCGGCGGCGACGGTGGTGGTTATGC
CTGTTGGCTGGCTCTGAGGTTGTATCAGGCTTGTTACTACTAAGTGGATTGTGTTGTTTCTGAGATTATGGAGCAAGTTTTCGTCTGGCCAAGC
TCCTTCCATCATCGGCTTCTCTCTTTCCAAGAAGCGCTCGATTGGCGTTTTCTTGTTCCTTCTCATTTCCTTGTTGGCTCTTTCGTTAACTGCA
CTTAGTTTTCACACACTCTCCTAATCAAGTTTAATTAGTGAAGCCGTCAGGCAAACAGGGTTGAAGTCTGCATATTCTTCCTTCGCATACTCCC
AGAGAAACCTCTTAATCCCCCTCTTTTTTCTTATGGGCGCTTGTTGAAGAAGAATATATCACTTTCGTTTTCAAGTTTACATGATTCTATTTTC
TTGAGTATGAACCCCCTGAGTGAGTTGTTGTCTGCTTCAGGTCTTTCCTGTTAGCCAACACATTCTTTCTTGTTGGTTCCTTTCTGTCTTTGAG
TTCTCAGTATGTCTTTTCCTCTTCTATTGCTGTCTTTTTTTTCCCTTTATGGTCAACCCATTGGTGCTCATAGTAATAACGGTCAGTCTACCCA
GCTGGAGAATCATTGATTTACTGCTTTTGTTTCT |
Primers for UN16686 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGATAGCGACGCCAGAAAAA |
59.982 |
20 |
CGACGGATATCCAGAGCTTC |
59.797 |
20 |
166 |
1129 |
1294 |
| 2 |
TCCATTCACGAGACATTTGC |
59.654 |
20 |
CGACGGATATCCAGAGCTTC |
59.797 |
20 |
232 |
1063 |
1294 |
| 3 |
GAGATAGCGACGCCAGAAAA |
60.49 |
20 |
CGACGGATATCCAGAGCTTC |
59.797 |
20 |
167 |
1128 |
1294 |
|
|
