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Simple sequence repeat (SSR)
>UN16743
GGACCCATAAACCATAATCATCATATTCATAAAGTTCATAGCTAAGTGAAACGAATCTCACAACAGATAAAAGGACAAACATAACATAAAACTA
AAAAACAAAACTAATCTGAAGTGAGACTTTTGGATACAAGCATAAATGCCTTTTGTCTCACTTTTCCCAGAATAGATACCATAAAACAAGAGAT
TCAAAACTTAAACAGTAGAGTAAGACAAACTCATCTCATTATTCGTCATCGCTGTCTTTGCTTTTCTTCTTCTTCTCCTTCTTTTTCTTCTTCT
CACTCTTCTCTGCTGATTCACCACCACCAGCTTCATCTGTCTCTTTGTCCTTCTTTTTCTTCTTCTTCTTCTCACTCTTCTCAGCTGGTGATTC
ATCTTCACCATTAACCGCAGAAGCAGCTTCATCTGTCTCCTTGCTCTTCTTTTTCTTCTTCTTCTCCGACTTTGGTGTTGCCAACTCTTCTTTA
TCCTCCTCCTTGTCCTTCTTTTTCTTCTTCTCCTTCTTCTCAGATTTCACCTTCTCTTCAACCTCAACATCTTTTGTTTCGGCTTTCTTGGAAG
ACACAGCCGCAGGGCTGTCACTGCTCTCATCATGCTTACGCTT |
Primers for UN16743 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATTCACCACCACCAGCTTC |
60.52 |
20 |
CCAAGAAAGCCGAAACAAAA |
60.215 |
20 |
265 |
297 |
561 |
2 |
GATTCACCACCACCAGCTTC |
60.52 |
20 |
CTGCTTCTGCGGTTAATGGT |
60.27 |
20 |
106 |
297 |
402 |
3 |
GATTCACCACCACCAGCTTC |
60.52 |
20 |
CTTCCAAGAAAGCCGAAACA |
60.357 |
20 |
268 |
297 |
564 |
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