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Simple sequence repeat (SSR)
>UN16747
CATATGTGGAAATGAATTAAAATACCTTTTCCTCTTTCGCTAAACAGAGGGAGGGAGGCACTTTCTTCGCCGGTAACAGAAAAAAATAATCATA
TAAACTAATCATCATCATCATCATCATCATCATCATCATCATCATCATCCCTTCCGTCTTCAAATGTCTTCTCGCCGGAGAGTTCTTCTTAAGG
TTATCATCCTCGGCGATAGCGGGGTTGGGAAGACATCTTTGATGAATCAGTTTGTGAACCGCAAGTTTAGTAATCAGTACAAAGCTACGATTGG
AGCTGATTTCTTGACTAAAGAGGTTCAAATTGATGACCGCATCTTCACTTTACAGATTTGGGATACTGCTGGACAAGAAAGGTTCCAAAGCTTG
GGAGTTGCGTTCTACAGAGGAGCTGACTGTTGTGTTCTTGTGTACGATGTCAATGTTATGAAATCCTTTCGAGAATCTTAATAACTGGAGGGAA
GAGTTCTTGATTCAGGCTGGTCCATCCGATCCTGACAACTTTCCGTTTGTCGTCTTGGGGAACAAGACCGATGTTGATGGTGGCAAAAGCCGAG
TGGTTTCTGAGAAGAAAGCAAAGGCGTGGTGTGCGTCTAAAGGAAACATTCCTTACTTTGAGACATCTGCCAAAGAAGGATTCAGTGTAGACGC
AGCTTTCGAGTGCATCACCAAAAGTGCTTTCAAGAATGAACCTGAAGAAACCGTACCTACCCGACACGATTGATGTTGCTGGAGTCAGCAACAC
AGATCAACAGGTGTGAATGCTAATCAAGCAAAAGTTCTTTCAGTTCATTTGAATGTTACAGAGATCTACGACTATAGC |
Primers for UN16747 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTCGCCGGTAACAGAAAAA |
60.236 |
20 |
GCGGTCATCAATTTGAACCT |
59.939 |
20 |
258 |
65 |
322 |
| 2 |
GCTAAACAGAGGGAGGGAGG |
60.204 |
20 |
TATCGCCGAGGATGATAACC |
59.885 |
20 |
168 |
39 |
206 |
| 3 |
CTAAACAGAGGGAGGGAGGC |
60.204 |
20 |
TATCGCCGAGGATGATAACC |
59.885 |
20 |
167 |
40 |
206 |
|
|
