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Simple sequence repeat (SSR)
>UN01708
GGCTCAGAAGCAAGTCTTCCATTGCTGCTAAACCCTAAAACCTATTACAAAACCCTTGTTCACCTTCCTTCTTGGCCGCGTCCTTCACTCGCTC
CCAATCAATTTAGAGGTAAACAATGATAACTGCACTTTCATGGATACCTAAAGGGTCTCTAAAGGCTGTTCCTGATGCTGCTGAGCCTCCTTCA
AAGGAAGAAATCAAAGAGCTTATCGAGAGTGGAGCTTTCGTGGGAAGTGTGGATGGTAGTAACGAGGATGAAGAAGAGATGGAAGAAGAAGAAG
AAGTAGGTGGAGATCAGGTTAGTGAAGTTGACCGTGCCAAGGCTGTAGCTGAAGCTTTTGGTAAATCTTCCAATGCCAAATCTTCTTCCATGGA
GGTTGATGAGGTAGCTGCTGCAATGAAAGAACTCGACATGGATAACTATGATGAAGAGGATGATGGAATTGAACTCTTCAGCTCCGGGAATGGG
GATCTTTTTTATGCAAGTAATGAGTTGGATCCATATCTGAAGGATGTTGATGATGATGATGATGATGAAGAGGATATTGATGATACGACAATCA
AGCCAACTGATTCAGTGATTATCTGCGCTAGGAATGAAGATGAAGTCAGCCATCTTGAGGTTTATGTGTACGAGGAGTCATCCACCGGATCACC
AAACATGTATGTTCATCATCACATAGTTATACCGGATTTTCCATTGTGCACTGCATGGATTGATTGTCCACTTAAAGGAGAGAC |
Primers for UN01708 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTTCGTGGGAAGTGTGGAT |
59.966 |
20 |
TCCATGGAAGAAGATTTGGC |
60.014 |
20 |
154 |
223 |
376 |
| 2 |
CTTTCGTGGGAAGTGTGGAT |
59.966 |
20 |
ATTCCCGGAGCTGAAGAGTT |
60.212 |
20 |
245 |
223 |
467 |
| 3 |
CTTTCGTGGGAAGTGTGGAT |
59.966 |
20 |
AGCTTCAGCTACAGCCTTGG |
59.78 |
20 |
116 |
223 |
338 |
|
|
