 |
Simple sequence repeat (SSR)
>UN16896
AAAGCTCACTCAAAACACATCTCACCAAACGCACACTTACCTCCGCACAGCAACCAAAAGCCAATGGATTCAGATTTCGGAATCCCAAGAGAGC
TCTCTCCTCTTCAGCAACTTCGTTCTCAGTACCAGCCCGAGCTTCCTCCTTGTCTTCAGGGAACTGCTGTCCGCGTGGAGTTTGGTGATGGAAC
CACTGTGTCTGAGGCTTCTGATTCCCATATCATAGCTCGTGCCTTCCCACATACCTTAGGCCAGCCTTTGGCTCACTTCCTCAGGGAAACCGCC
AAAGTTCCTGATGCTCAGATTATCACTCAGCTTCCATCTATCAGAGTTGGAATCGTGTTTTGTGGAAGACAAGCTCCGGGTGGACACAATGTAA
TCTGGGGTCTTTACGAGGCTCTTAAGATGCACAACGCGAAAAGCACCTTGCTTGGCTTTTTGGGTGGTTCGGAAGGTCTGTTTGCGCAAAAGAC
TCTGGAGATCACTGATGATATTCTCCAGACTTACAAAAACCAAGGTGGGTATGATTTGCTGGGAAGAACCAAGGATCAGATCAGAACCACTGAG
CAGGTTAACGCTGCACTCAAAGCTTGCACTGATTTGAAGCTAGATGGCCTTGTTATCATCGGAGGTGTAACATCAAACACAGATGCCGCTCATC
TTGCTGAGTTTTTCGCTGAAGCAAAATGCTCTACAAAGGTGGTGGGTGTTCCAGTTACTACAAATGGCGATCTCAAGAATCAGTTTGTGGAGGC
AAACGTTGGTTTTGACACCATTTGCAAGGTGAATTCCCAGCTCATTAGCAATGCCTGCACTGATGCTCTCTCTGCAGAGAAGTACTATTATTTC
ATCCGTCTCATGGGTCGGAAGCATTCTCATGTTGCCCTTGAGTGTACCCTCCAGTCTCATCCAAACATGGTGATACTGGGCGAGGAGGTTGCAG
CATCTAAGCTCACCATTTTTGACATTTCTAAGCAGATCTGTGATGCAGTTCAAGCAAGAGCAGGACAAGACAAGAATCATGGAGTCATCCTCAT
TCCCGAAGGGATCATAGAGAGTATTCCTGAAGTCTACGCTCTGTTAAAGGAAATTCACGGGCTACTTAGGGAGGGTGTAGCTGCTGATAATATC
TCTACTCAGCTCTCACCTTGGTCATCTGCTTTGTTTGAATTTCTTCCTCCATTCATTAAGAAACAGCTACTTCTCCATCCTGAGTCTGATGATT
CTGCTCAGCTATCCCAGATTGAGACGGAGAAACTTCTTGCGTATCTCGTGGAGACTGAAATGAACAAGCGCTTGAAAGAAGGCACATACAAGGG
CAAGAAATTCAATGCTATATGCCACTTCTTTGGTTACCAAGCTCGTGGATCTCTCCCATCGAAGTTTGGTTGTGATTATGCTTATGTTCTTGGA
CATATATGTTACCACATCCTCGCAGCTGGCCTGAATGGTTACATGGCAACAGTGACCAACCTAAAGAGTCCTGTAAACAAGTGGAAGTGTGGTG
CTGCACCTATTACAGCAATGATGACGGTGAAGAACTGGTCCCAAAATGCTGGCTCTGCATCATCAACTTCAATTGGTAGACCTGCAATTCATCC
GGCAATGGTGGGTTTGAAAGGCAAAGCATACGAGCTTTTGAGACAGAACGCAGAGAAACTCTTGATGGAAGATCTGTACAGAAACCCAGGACCG
CTTCAGTACGATGGACCTGGTGCAGATGCTAAAGCAGTGAGTCTCTGTGTTGAAGATCAAGATTACATGGGACGTATCAAGAAGCTGCAGGAAT
ATCTAGACCAGGTGAGGAGGATAGTGAAGCCAGGATGTTCGCAAGACGTACTGAAAGCAGCACTGAGCGTGATGGCTTCGGTGACCGATGTTCT
CACTACCATTTCTTCATCTTCAAATGGTGGTCAACAAACTGCTTAGAACTCAAAAGAGAGAGAGAGAGAGAACCAACCAACTCTTTAGAAAGCT
TCAAATGTTCTTTCAATATCCCCACATTTCGTGTTTTGGTTTTGTTTAGAAAGGAAGATGAACAAACAAGTTTTGGATTTTTACGTTATTCGAC
AGACTTTACGCG |
Primers for UN16896 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGGATGTTCGCAAGACGTA |
59.864 |
20 |
ACCAAAACACGAAATGTGGG |
60.647 |
20 |
198 |
1817 |
2014 |
| 2 |
CGCAAGACGTACTGAAAGCA |
60.195 |
20 |
ACCAAAACACGAAATGTGGG |
60.647 |
20 |
189 |
1826 |
2014 |
| 3 |
CAGGATGTTCGCAAGACGTA |
59.864 |
20 |
AAAACACGAAATGTGGGGAT |
59.15 |
20 |
195 |
1817 |
2011 |
|
|
