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Simple sequence repeat (SSR)
>UN01708
GGCTCAGAAGCAAGTCTTCCATTGCTGCTAAACCCTAAAACCTATTACAAAACCCTTGTTCACCTTCCTTCTTGGCCGCGTCCTTCACTCGCTC
CCAATCAATTTAGAGGTAAACAATGATAACTGCACTTTCATGGATACCTAAAGGGTCTCTAAAGGCTGTTCCTGATGCTGCTGAGCCTCCTTCA
AAGGAAGAAATCAAAGAGCTTATCGAGAGTGGAGCTTTCGTGGGAAGTGTGGATGGTAGTAACGAGGATGAAGAAGAGATGGAAGAAGAAGAAG
AAGTAGGTGGAGATCAGGTTAGTGAAGTTGACCGTGCCAAGGCTGTAGCTGAAGCTTTTGGTAAATCTTCCAATGCCAAATCTTCTTCCATGGA
GGTTGATGAGGTAGCTGCTGCAATGAAAGAACTCGACATGGATAACTATGATGAAGAGGATGATGGAATTGAACTCTTCAGCTCCGGGAATGGG
GATCTTTTTTATGCAAGTAATGAGTTGGATCCATATCTGAAGGATGTTGATGATGATGATGATGATGAAGAGGATATTGATGATACGACAATCA
AGCCAACTGATTCAGTGATTATCTGCGCTAGGAATGAAGATGAAGTCAGCCATCTTGAGGTTTATGTGTACGAGGAGTCATCCACCGGATCACC
AAACATGTATGTTCATCATCACATAGTTATACCGGATTTTCCATTGTGCACTGCATGGATTGATTGTCCACTTAAAGGAGAGAC |
Primers for UN01708 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AACTCTTCAGCTCCGGGAAT |
60.212 |
20 |
ATGCAGTGCACAATGGAAAA |
60.119 |
20 |
267 |
448 |
714 |
| 2 |
AACTCTTCAGCTCCGGGAAT |
60.212 |
20 |
TGCAGTGCACAATGGAAAAT |
60.119 |
20 |
266 |
448 |
713 |
| 3 |
AACTCTTCAGCTCCGGGAAT |
60.212 |
20 |
CAATCCATGCAGTGCACAAT |
60.549 |
20 |
273 |
448 |
720 |
|
|
