 |
Simple sequence repeat (SSR)
>UN16908
AAAACTCCCGCTCGGTCGAGCGGGTCATGTTCTAGTTTAGTATTATATAACAAACCATAAAATTATTACATCAACTATTACATAAATGAAAAGA
CAAATACTTGGACCAAGTTGACCATTACAAAACCACAACACAAGGCACTGCTACTACCTCCCTCTCAGACAAACATGTCTAGACCCCAGGAAAT
TTGGAACCCAAACCCAACCCCCTTTTATTTCAACGTTATTTTATTGCTTGGCATACAAGCCAAGGAAGACTCATAGGTTACAAACCAAGAAGCA
TACATATAGAATCAACGACTTCAAATGAGAGACACACATACATAAGAGACTCTGAACAAGGTCTAGAAAAAGAAAACAAGAAAGTGATAAAATT
AAGAAGGAAAAAAGAAGAAGGAGAAAAGGTATCTTAGCGCTAAGACACCAAGAGTTTATTACTGATAGTACATGAGCTGCTGATGCGCCGCAGC
TACATTCTGAAAACCACCATCGTACATAGCCGCTGCACTTGCCCCAGCTGCATTGACATGCCTTAGAGAATGCTGAGCCTGAGGGTGCATCTTG
GCTAAAGCCAGTTGCCTCTCATAGGCTAAAAGGTCCATTGGGGACAGACCAGGGACTGCCACTGGCACTGGTGGCGGAAGCGGGTTTGAGGCTG
TCCCTATTGGAGTTGGCTTGTTTCCCCATGAACACTTTATCTGTCTGTTAAAGAGGAAAGGCTGAGAGTTGCCCATTTGAATAGCAAGAGCAGC
CTCATCATGAGTGTTGTATCTCACAAAACCAAAGCCTTTGTCTCGCTGGACACGGACCTCTTCAATCACTCCAGCGCCAAGTGTATGGAACAGG
CGGTGTAGATCAAGCTGAGTTACTTCAGGAGCGAGGTTTCCTACATACACAGTGGTATACTGAGGATTGTTTTCAGGAGCTTCTTCGTTTGAGA
TTGAGATCTCTCTACCATCCTCTGACGAGCCGTTTGTGAGTTCAACGACACTTTTTCCATCAGAGCTATGTTTGTCCTCCCCAAAAGTAGCACC
TTTTGTCGCCCAGTTGCATCTGATTTGTCTGCTACTTAACCATTTACCATTCATTTCATTTATGGCATTTTGAGCATCTGCTGATTGCGGAAGG
AAACAAACCCAAAGCCTCTTGAGCGTCCAGTTTTCTGGTCCCACATTACTCTTGCATCCGAGCAAGTGTTAAAGGCAGAAAAGCTTTCAAACAA
AGCTGCATCAGTAACATCTGGACTGAGATCTCCAACAAAAATGTTGAAATGGCTTGATGTGTCTTCCCTTTGACCAGTAGCATACGCCCAGTTA
ACTTTGATAGGCCGTCCAAACAGATGCCTTCCGTTAAGAGACATGATAGCCAAACCAGCAGATCGTCGATCAAAGTAGTGAACAAATCCATATG
ATGACTTATCTTTTCTGATGAGTTTACAGCTCTCAACAGGGCCGGTGCTGGCAAAAATCTCTTGAAGAAGAACCTCAGTGACCTGCGTATGGAT
GTTGCCAGCATACACACTGCGGCAAGTAGTGGGATCAAAACCAGGAGGAAGGTTTCCACTTGGTAGAGGCTCCATCTGAGGAGGGGGAGGTGTT
GTTGCATCAAAGCTTGCTGCATCATTGCTTGTTGCTGCTGCTGCTGCTGTTTGAGCCTCGGATTCTGCATCTTTTTTTTTCTCACTGCGAGATG
AGATGGAAAATATCTGTTTTGTTTCCCGAGAAAAGACCTCTTTCCTCTTTTTAGCTTAGGGTTCGAAATCAACT |
Primers for UN16908 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGAACCTCAGTGACCTGCGT |
59.907 |
20 |
TTCCATCTCATCTCGCAGTG |
59.942 |
20 |
222 |
1479 |
1700 |
| 2 |
TGCTGGCAAAAATCTCTTGA |
59.542 |
20 |
TTCCATCTCATCTCGCAGTG |
59.942 |
20 |
245 |
1456 |
1700 |
| 3 |
GTTGTTGCATCAAAGCTTGC |
59.474 |
20 |
TTCCATCTCATCTCGCAGTG |
59.942 |
20 |
105 |
1596 |
1700 |
|
|
