 |
Simple sequence repeat (SSR)
>UN16919
GGAAACTCTCGATTTCCTTCCCTCAATACATATACAAAAGCCAAGTCGGATCACACATATAAATATAGTTTTACATGTTAAGCTTCTTGAAAAA
GCTAGGGTTTTATTGGAGCTTTGGTCGATTGTATGATCCGAGTATCATCAATCGAGACATGTCTTCTTCTTCTTCTTCCGAAATTAGGGCACAG
AAGAAGCAACCGCCGTCTCCGATCTCTTCTCTCCCGGAAGAAATCTTCGTCGACATCGTAGCGCGTGTCTCTCGATCCTATTACCCGACTCTCT
CCCAAGTCTCGAGGCGTTTCCGATCGCTCATCGCTTCACCGGAGCTATACGCGAGACGATCCTTCTTGGGGTGCACAGAGCAATTCATCTACGT
CGCAATCTCCAAGGATCAGACCTCTGACATCCACTGGTTTACTCTTTGCATCAAACCTAACAGAGAAACGACGAGTGATCATCGATTGGTTCAT
CTCCCTTCGCTTCCTCCGATGCCTCTACAGGGAAGCTACGTCGCCGTTGGTTCTAACATCTTCGTGATGGGTGGATTTCAAGATTGGAGCATCA
CGTCGAGTGTTTCTCTCATCGATTGTAGATCTCACACGTCTCGGCCTCTCGCTGATATGCCCAAGGCGGTCGCTGGTTCCGTAGCGCAAGTAAT
TGACGGCAAGATTTATGTAATCGGAGGATCAGATGGTCATTCGCCGATGAAATCAAGGTCAAGAACTATGATGGTGTTTGATACGGAGACTGAG
GTTTGGAAGCTTAAGCCGAGGCCAGATTGGGAGCAAGGCAAAGTGTGGTTTAGTAGTGTCGCTATGGGAGGTAAGATTTACATGAGGACTTGCT
ACAATAGCTTCGTTTACGATCCCATTGCAGTTCCCAATAGTTGCGTCGGAGATGAGCTTCTGCACTCCAAGGAGTGGTCCGGTTCTTGTGTCAT
CGATGATGTCTTGTATTACTATGACGTTCGTGGCAAGTGTTTGAGAGCTTATGATCCTAAGCTGAGATCTTGGGGAGTTGTGAAAGGTTTGGAA
GGTCTATTGCCGCGGGGTTGTTCATGGTCGAAAGCTGCGAGTTATGGAGGTGGGAAAATGGTTCTGTTCATGCAGAAGGAAGAGATCTGGTGTG
CGGAGATTGCCGTGGAGAGACGCCTAGGAGGAGGTGATATTTGGGGTACAGTTAAGTGGTGTGAGGTTGTGCTTGGTGGCAACTTTCGTATTAT
GGATTGTGTACCTGTTGCTGTTCTTCTCTGATCTTCTTGTGAATGAATACAAAAAAGGATACTTAGTAGTATTGTCTCTTGGTGCTTGTATGAA
TGTTTGCTTTGTAAAACCTCCCTTGGGATGTGTTTCTCAGACGTCAATGTTTCGTGTTTGTTGGGTCTATTTTACATCTGTGAATTGACTGAAT
CTAATCCTCATCATCATGATGTGTTCTTGTGTGCTTATGAGC |
Primers for UN16919 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATTGGAGCTTTGGTCGATTG |
60.074 |
20 |
AAGAAGGATCGTCTCGCGTA |
59.978 |
20 |
244 |
106 |
349 |
| 2 |
ATTGGAGCTTTGGTCGATTG |
60.074 |
20 |
CGAGACTTGGGAGAGAGTCG |
60.127 |
20 |
188 |
106 |
293 |
| 3 |
ATTGGAGCTTTGGTCGATTG |
60.074 |
20 |
TTGCGACGTAGATGAATTGC |
59.839 |
20 |
276 |
106 |
381 |
|
|
