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Simple sequence repeat (SSR)
>UN01715
GGATACGAAGCTGCGATAGAGCGAGAGAGTGACCAGAGAGAGAGAGAGAGAGAGAAGATTAAGCTAAGCGATGGGTCTGGAGAAGCAAGTCATC
AGACCCGGCACTGGTGCCAAACCCGCTCCGGGTCAAACCGTCACTGTCCACTGCACCGGATTCGGGAAAGGTGGTGATCTATCCCAGCAGTTTT
GGAGTACAAAGGACGCGGGGCAAAAACCTTTCTCCTTCCAGATCGGTAAAGGTGCTGTCATCAAAGGATGGGATGAAGGCGTTATGGGAATGCA
AATTGGAGAGGTTGCTCGCTTGCGGTGCTCACCGGATTACGCATATGGTCCTGGTGGATTTCCGGCGTGGGGAATCCAGCCGAACTCGGTTCTC
GACTTCGAAATCGAAGTACTCAGCGTGCAGTAATGCTCTCTCTATTGACAAAAGCGCAACAAAACTTAGGTTAAATTATTAAGTGGTGGTAACC
CTTTTATGTTCATCGCTTCGGGGATCTTTGTTCAAACAACACTATGTGATGTCACTCTTGTCAGTGCTTGTCTAAACTCGGTGGACAACGTTTT
ATCTTAAATAAAAGACCCCGTTACTCTTGTTTCGGTCCGAATGTTGCATGTTTTTTTTCAGTTATTGTGATATTATTATTGTAGTGTC |
Primers for UN01715 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGCTGCGATAGAGCGAGAG |
60.022 |
20 |
CAGTGGACAGTGACGGTTTG |
60.194 |
20 |
140 |
8 |
147 |
| 2 |
AAGCTGCGATAGAGCGAGAG |
60.022 |
20 |
AATTTGCATTCCCATAACGC |
59.801 |
20 |
279 |
8 |
286 |
| 3 |
AAGCTGCGATAGAGCGAGAG |
60.022 |
20 |
TGATGACAGCACCTTTACCG |
59.716 |
20 |
244 |
8 |
251 |
|
|
