 |
Simple sequence repeat (SSR)
>UN16990
GGGAGAAACAGAGAAAAGACGAAAATGGCAGGCGGAAGCGGCGGCGGCGGCACAACAACATCAGGAGCAACGGCGGATCTTCACTCCGCCGCGA
GATCCGGTGATTTAGCGGCAGTTCAACTAATCATCAGCTCTAATCCTCTGGCCGTCAATTCTAGAGATAAACATTCTCGGACTCCACTACACTT
GGCAGCATGGGCAGGGCACCACGAGGTCGTGAGCTACTTATGCAAGAACAAAGCCGATGTTGGTGCTGCAGCAGTGGATGATATGGGTGCCATC
CACTTTGCTTCTCAGAAGGGACACTTGGAAGTTGTGAGGACTCTACTGTCTGTCGGAGTTTCTTTGAAGTCCATCACTCGCAAAGGACTGACAC
CTCTTCACTACGCTGCTCAAGGTTCTCACTTGGACCTCGTCAAGTACTTGGTTAAGAAAGGAGCCAATGTCAGAGCCACGACTAAGGCCGGGAA
GAATCCTGCGGATGTTGCGGGGAACCCTGAAACGCAAAGCTTCCTCGAAGAATGCGAAGAGCAAGCGAGGAAAGATAAGGTGAAGAGCAGTCAG
AAAAAGACAGAGGAAGTGAAACCAGAGAGTTCTAGTGTCGACAAGGGTTTGAAAAGGAAGGATTCTGAGGATGATGGGAACGAGCAGGAGGAAG
AGAAAGTAGAAGCTTCGCCGAAAGCGAAGAAGCCAAAAGTTGTTCTACGTCATCTTCAAGAGGAGACTGATGACACAGAAGCTGATCAAGAAGA
AGAAACCTAGAAACCAAACGATGGAAACTTCAACTGAAGTGTCTACTTGAAATGAGTTGTAACATCCATCACATGAGATAATTGAGAGATTTTA
CCAATACTTTAGTTTGTTTCTATGATACGTATAAGTTTGTAGAAGAATTCATCAGTTTCTTTTAGGCTGTTTAATCAAAACGTTCATCAGATTC
TAAAACTGTTCCTCTGCATTGCTTACTTTTGCTGTAAATGGTTTAAAGATTACATCACACAACTCTTTATACATGTGTTTCTTCTAAGCCTGTG
GAAACAGAATTTTCAAGTACTGTGTAGCCATCCATCCGAGAATGTAGAAGTAAACAATGACCAAACACGCACGCTTCACTTGTACCAAGAGATT
CACTTTAGACAGCTGGCTCTTAACCGAACAACACGCTCGAGGGAACCAAGATTTTGCATTACTTAAGATCCGTACGATGAAGACTGTGATTATG
GAAGTAGAGAAGCCAGATACAACGCCAGCTATCACATCATATCTCCAGAACTTTGGTCTTCCTTTTCCATTGAACCAGGACTGTATTAACTTGG
AGACTAAGACAGCGTATTGTTTAAAAATGTCGGTGAAAGAAAGATCATTTGGTTGGCAGCCGAAAAAGCCGTCCTGATAAAGCTTGATTTTTGG
AATCCCTAATGTGTACCAGCAATCGTAAGTCTCATTCACCTTGAAGTTATCTTTGGTAAGCAAAGCAGCACCAAAGTTAGGTCTGCACTCAGGA
GGAAGGGCTTCATTTGGTGCTTCTGAGAAGGCTAGCCTCGTTTGACCCATTAAGTGATCTTTATATTCTACCTTGAAGACAGAAGCCCAATAGT
AATCATAGCGACATCTGAATTTATCTCTCTCAAAAGGGTGAAACACATGTTGTGCTTTACTGTTCAAAAGTCCAATGCCGCACACTTTAGAAGA
CCTAAGATCAACAGAGCTGGAAAGAATCTTGCAGCGGGAAGCAAGAGAGGCGGAGGAAGAAGAAGAAGAAGAAGAAACCCACAATTCACCGAGT
ATAATCACCAACACTCCTAACAGAAACGACAAGACGACGAAGACGATGATCGAGATTCCTATCACTGTACAGAATCGTAAAGCTAACAAAGAGA
AAACCCTCTTTTGCTTCTTCGCATCTTCCGAATCCATTTTAAGCTTTCTTCTTCTCCGTGTGAGTTTACTCAGAACAAAGAAACTCAGGAATCC
ATTTTTCAACGGTGATCGGGATATCGAACGTAGGGTCACCGGAGATCAAATCTTATGGAGTTCTGATTCTTCAGATTGTTTTTTTTATTGGCTG
TTTATTTCCCCTTTTC |
Primers for UN16990 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCGCACACTTTAGAAGACC |
59.882 |
20 |
TCATCGTCTTCGTCGTCTTG |
59.984 |
20 |
161 |
1675 |
1835 |
| 2 |
GCCGCACACTTTAGAAGACC |
59.882 |
20 |
TCGTCGTCTTGTCGTTTCTG |
60.025 |
20 |
152 |
1675 |
1826 |
| 3 |
CAATGCCGCACACTTTAGAA |
59.872 |
20 |
TCATCGTCTTCGTCGTCTTG |
59.984 |
20 |
165 |
1671 |
1835 |
|
|
