Simple sequence repeat (SSR)
>UN17000
AATATACCAAAGAAATAATTGTTCATGGATCATAGTCATTAAGCTGACTAACCCTATATGGAGAGAGGAGACATAGATAATAACAATCACAAAA
GTCAATATATTTTTTTTTGTTTTCTTAAGTTACAAATGAAAGCATATTAGACAATCACACAATCAAACACATAGAAGCAGGAAAAAGTTAAGGT
TAAGAGAGTTATTACGCAACATATTATGCCAAATATTTATTCAAACACACACACACATATCTCTTAACATCAAATACATTTTTTCCCACCGGTT
TTCCTGGATACATGTGATTTACACCACAATTAACAGCTGCAGCTGTCCCCACAGCTACAGTTTGATCCGCAGCTGCAGTTGTCGCACTCCGTGT
TGTAGTTCTTCTCGCAACTGCAAGAGTCGCCACATTTGCAACCGGAACCACATCCACAGTTAGAACCTGCCATTGCTTCTCTTCCCTTTAATTT
AAAGTTGTAGTTTGTTTTCTTTTCTTCTTTTTGATTGCTTTATGTGTTGTGTCC |
Primers for UN17000 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAATCAAACACATAGAAGCAGGA |
59.28 |
23 |
TGCGGATCAAACTGTAGCTG |
60.011 |
20 |
200 |
154 |
353 |
| 2 |
CAATCAAACACATAGAAGCAGGA |
59.28 |
23 |
CAGCTGCGGATCAAACTGTA |
60.011 |
20 |
204 |
154 |
357 |
| 3 |
CAATCAAACACATAGAAGCAGGA |
59.28 |
23 |
TCTTGCAGTTGCGAGAAGAA |
59.864 |
20 |
248 |
154 |
401 |
|
|
