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Simple sequence repeat (SSR)
>UN17013
AAATAATGTCATGGAGAGCAATACTTATTCATAAAGCAAACAGATACAAGACACTATTTGTAGCTACAAACCGATATCACCCCGGAAGTAGGGA
TTTTATAGAGCACAAAGTACATCATACAACACCACATTACACTGAGATTCAAAAAAAATAAAAAAAGAATGCATCTTCAAAGAGAGCATAATAA
TCTTTATGGATTTTAAGAAGTCAGTATTGTGATGTAGGAAGTCGCAAAAAGGATAGCAAGAAGAGGGAATGAGAACTTGATAGTACTCCCATGA
GATGATGATGATGATCTATGTCCTGGATCTGGTTTTGATCCATTTCCATGTTCTGAAGTGTTTGATGATCCTATAGGCGAATTAACTGAAGAAC
CACCGTTGCAGCTACTAACTGGAGGAGTTTGAACATTACAAGCTTCAGGCAAAGCAAAAGCTTGTGTTTGATTAAAATTGATCCCAAGATGAGG
GGCTCCACCTTTGAGAAGTTCACACAAACACTCACCAGAAGACCTGACAACATGAGCCAACTGACTGCAGCATTGTTGAGAAGGAGAAGAAGAG
TTTCCAGTGATGTAGCCGAGACATGGCGCCATTTCGAAGAAGTGTAGAGAGCGAAGGGTTGCTAGGGTTTTAGTTTTGATTCGAGATGATTAAG
CGTATTCTGAAATTGAGAGTGTTCC |
Primers for UN17013 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATATCACCCCGGAAGTAGGG |
60.032 |
20 |
GGATCAAAACCAGATCCAGG |
59.336 |
20 |
250 |
74 |
323 |
2 |
CCCCGGAAGTAGGGATTTTA |
60.136 |
20 |
GGATCAAAACCAGATCCAGG |
59.336 |
20 |
244 |
80 |
323 |
3 |
TCGCAAAAAGGATAGCAAGAA |
59.971 |
21 |
AAGCTTTTGCTTTGCCTGAA |
60.131 |
20 |
210 |
230 |
439 |
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