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Simple sequence repeat (SSR)
>UN01727
CAAAAAGCAAACTTCTTTACAAATAAATGTATTTAACTTCCTCAGGACAATACAAGAATACAAAAACATACCAAGCTCCATCAGAGCTCTCTTT
ATTACAGAACAAAATAATAAAAAAAATCCCTACATCGGAAATCAACCACCGAGAGAGAGAAATAGGAGAGCTTCCGAAACAAAGTTCCAAGTGT
CCAATAATTTGTTTTTTTTTTCAGTTCCCGAAAATACATATGCTAAAGAACGATAGAACAACAAAACACACACAGAAAATAAAAGTACCTTCGG
GGAAAAATCTTGTGGTTGGTGGGTTACACTCTCATTCAGCTCTAGACTGGCCAGCTCTTGAGGAGAGGATGATTCCCACAATAAGGCCGTAAAG
AGCAAGCGCTTCTGCGAAGATAAGGATAAGAATCATCCCGACAAAGAGCTTAGGCTGCTAAGCATTTGCCCTGACACCGGCATCACCGACAATC
CCAATGGCCATACCAGCAGAAAGACCAGCAAGACCACAAGCAAGACCGGAGGAGAGATGTGCGTACCCATCGAAGAGGTAGTAAGACTTGGCCT
TGGGGTTAATCCCGGTACTGATGATAACAGCAATAATCAAACCGTAAATACCCAATACACCAGCCATGACAACGGGGACGATGGACTTCATGAC
CAGCTCTGGCCTCATGACTCCCATAGAAGCCACACCAACTCCACTCTTTGCTGTTCCATAAGCAGCTCCCATACAGGAGAAGACGAGTGCGGCG
GCAGCGCCGAGGAAGCCGAAGAAAGGAGCTGTTTCATCGCCGCTGAAGGTAGACATGTCGAAGGCTTGTGATTTGGATCTGAGATCAGGTCGAT
GATTCAAATCTGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGAGAGAGAGAGGAGATGGAGTTCGATGGGTAAGAAAGGAGGAGACG
CGACGGTCGGTCACCACTACCGCTCGTCATAACCACCTCCGATTGAACCTTGTCACCTCCTCCTCTATCAAACCCCTCTGAATCTCCAACCCTT
GTCACCACCACCATCTCTACTCAGATCCATCTTGACCGGAGTCGCTACAACCACCGTTCGTCATAACCACCACTGGTCACATCTCTGTCTCTCT
CATCGATTTGGAGTATACTTCTCAGACGCAAGAGTTACAAGAGGGATGAAATGGAAGTGGTGGTGGTGAGATGGAAGTGGTGGTGGTCTCGGCA
TCAACAGTGGTAGTCTCGGCGTCGACAATGGTGGCTGTGTGCGGTGGAGGAGATTGAAGAAGCTTGCTGTGGTGGTCGTGGCTGGTGGTATGGG
CGTCAACAAGGGGTGCGGCGGAGATGAAGAAGAACGTGGTTTAGTTAGGGTTAGTTAGGTTTAGTTAGGGTTGGTTAATAAACCGGATTTGTAT
GTAAACCAGTTTTTGTAATAAACCGATATCATTTTGTAAACCAAAATTTCAATAATAAATAATTTTATTCTCAGACCAAAAAAAAA |
Primers for UN01727 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
GAAAGGAGCTGTTTCATCGC |
59.962 |
20 |
AGGTGACAAGGTTCAATCGG |
59.966 |
20 |
226 |
773 |
998 |
| 2 |
GAAAGGAGCTGTTTCATCGC |
59.962 |
20 |
ACAAGGTTCAATCGGAGGTG |
59.966 |
20 |
221 |
773 |
993 |
| 3 |
GAAAGGAGCTGTTTCATCGC |
59.962 |
20 |
TGGAGATTCAGAGGGGTTTG |
60.042 |
20 |
256 |
773 |
1028 |
|
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