|
Simple sequence repeat (SSR)
>UN01727
CAAAAAGCAAACTTCTTTACAAATAAATGTATTTAACTTCCTCAGGACAATACAAGAATACAAAAACATACCAAGCTCCATCAGAGCTCTCTTT
ATTACAGAACAAAATAATAAAAAAAATCCCTACATCGGAAATCAACCACCGAGAGAGAGAAATAGGAGAGCTTCCGAAACAAAGTTCCAAGTGT
CCAATAATTTGTTTTTTTTTTCAGTTCCCGAAAATACATATGCTAAAGAACGATAGAACAACAAAACACACACAGAAAATAAAAGTACCTTCGG
GGAAAAATCTTGTGGTTGGTGGGTTACACTCTCATTCAGCTCTAGACTGGCCAGCTCTTGAGGAGAGGATGATTCCCACAATAAGGCCGTAAAG
AGCAAGCGCTTCTGCGAAGATAAGGATAAGAATCATCCCGACAAAGAGCTTAGGCTGCTAAGCATTTGCCCTGACACCGGCATCACCGACAATC
CCAATGGCCATACCAGCAGAAAGACCAGCAAGACCACAAGCAAGACCGGAGGAGAGATGTGCGTACCCATCGAAGAGGTAGTAAGACTTGGCCT
TGGGGTTAATCCCGGTACTGATGATAACAGCAATAATCAAACCGTAAATACCCAATACACCAGCCATGACAACGGGGACGATGGACTTCATGAC
CAGCTCTGGCCTCATGACTCCCATAGAAGCCACACCAACTCCACTCTTTGCTGTTCCATAAGCAGCTCCCATACAGGAGAAGACGAGTGCGGCG
GCAGCGCCGAGGAAGCCGAAGAAAGGAGCTGTTTCATCGCCGCTGAAGGTAGACATGTCGAAGGCTTGTGATTTGGATCTGAGATCAGGTCGAT
GATTCAAATCTGGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGAGAGAGAGAGGAGATGGAGTTCGATGGGTAAGAAAGGAGGAGACG
CGACGGTCGGTCACCACTACCGCTCGTCATAACCACCTCCGATTGAACCTTGTCACCTCCTCCTCTATCAAACCCCTCTGAATCTCCAACCCTT
GTCACCACCACCATCTCTACTCAGATCCATCTTGACCGGAGTCGCTACAACCACCGTTCGTCATAACCACCACTGGTCACATCTCTGTCTCTCT
CATCGATTTGGAGTATACTTCTCAGACGCAAGAGTTACAAGAGGGATGAAATGGAAGTGGTGGTGGTGAGATGGAAGTGGTGGTGGTCTCGGCA
TCAACAGTGGTAGTCTCGGCGTCGACAATGGTGGCTGTGTGCGGTGGAGGAGATTGAAGAAGCTTGCTGTGGTGGTCGTGGCTGGTGGTATGGG
CGTCAACAAGGGGTGCGGCGGAGATGAAGAAGAACGTGGTTTAGTTAGGGTTAGTTAGGTTTAGTTAGGGTTGGTTAATAAACCGGATTTGTAT
GTAAACCAGTTTTTGTAATAAACCGATATCATTTTGTAAACCAAAATTTCAATAATAAATAATTTTATTCTCAGACCAAAAAAAAA |
Primers for UN01727 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAAAGGAGCTGTTTCATCGC |
59.962 |
20 |
AGGTGACAAGGTTCAATCGG |
59.966 |
20 |
226 |
773 |
998 |
2 |
GAAAGGAGCTGTTTCATCGC |
59.962 |
20 |
ACAAGGTTCAATCGGAGGTG |
59.966 |
20 |
221 |
773 |
993 |
3 |
GAAAGGAGCTGTTTCATCGC |
59.962 |
20 |
TGGAGATTCAGAGGGGTTTG |
60.042 |
20 |
256 |
773 |
1028 |
|
|