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Simple sequence repeat (SSR)
>UN01730
GGGAATTCAATCAATCAGAAAAATAAATCTGTTTTCGATCTGAGAGAAAAGAGAGAAAGCGTCGTGCGAAGAAGAAGAAGAAGAATCAAAAAGA
GATGGATGGATTGAAGGGATTCTGGGCGGAGAAGTTATCATTCCTGGAGAATTACACCAGGTTCACCAAACGTGACACGCCTCTTCCTTCTTGG
TCTTCCTCCGACGTCGATGAGTTCATTGCCTCCGATCCCGTCAATGGACCCACCCTGAAAACTGCTAGGGAAGCTGCGACTTTCGGTGCTACTG
GAGCCGCACTTGGAGCTGTGTCCACTGCTGCTTTTGCTTGGAAATACTCCAGGAGTCCACATGGTACTGCACTGTCCTTTTTAGGAGGAGGTCT
TTTTGGTTGGACCTTTGGGCAAGAAGTAGCCAACCACACGATGCAATTGTATGCTGGACACAATGGCGGCTCAAGTTAAGTTCATGGAATGGTG
GGAACGCAAGTCTCAGGGAAGGTCCTGAACCCAAAAAAACAGAGAGACGGGTGCTACTTTCTCGCCCAAGCTTGTCTTGCAAACAACGTGAGAT
GGTGGCAGCAGTTAAATCCATTTTCAGTCTCTCTTTCGAACCTTTCTTTATGTTCTCACTCTCGAAACATGTTTGTTTTCCATGTCTCAATAAT
TCAACAAGCTCCATGGAGAATGCTGAGTAGATGAATCGAAACAAACTAAATGGTCTCATTTGGATTTTTATAATAAGAAGTTTATTCAGTGTTA
AATACG |
Primers for UN01730 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGAAAAGAGAGAAAGCGTCG |
58.474 |
21 |
CAAGAAGGAAGAGGCGTGTC |
59.989 |
20 |
144 |
44 |
187 |
2 |
GAGAAAAGAGAGAAAGCGTCG |
58.474 |
21 |
AAGAAGGAAGAGGCGTGTCA |
59.989 |
20 |
143 |
44 |
186 |
3 |
AGAGAAAAGAGAGAAAGCGTCG |
59.433 |
22 |
CAAGAAGGAAGAGGCGTGTC |
59.989 |
20 |
145 |
43 |
187 |
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