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Simple sequence repeat (SSR)
>UN17278
ATCCACAATCTCCAAAAACATCCGAGATCTCCCTTCTCCCTTTGTGTGCGCTCCGAGTCAGTTAGACATGGCCACCACCGCATCTCCAGCTCCG
ACGAAGAAATCGAGAAACAGCAGAAAGGCGTTGAAGCAGAAGAACGAGATCGTCGCGACGGCGGAGACTCCGTCGTCGCCTGTCTCCGCCGCCA
AGGGGAAGGGGAAGAAGTCGTCGTTCGAGAAAGATCTGTTGGAGATGCAGGCGATGCTGGAGAAGATGACGATCGAGAAGGATAAGACGGAGGA
GTTGCTTAAGGAGAAGGAGGAGATTCTGAGGAAGAAGGAGAAGGAGCTCGTGACGAGAGACGCTGAGCAGGAGAGGCTCAAGACGGAGCTGAAG
AAGCTTCAGAAGACGAAGGAGTTCAAACCTAACATGACGTTTGCTTGTGGACAGTCTCTCACACAAGGTGAGGAAGAAAAGGTGAACAAGAAGA
AGAAGAAGAAGGATTGTCCCGAGAGGAAGCGACCATCGTCGTCATACATTCTGTGGTGTAAGGAGCAGAGGGATGAAATCAAGAAGGAGAATCC
TGAAGCTGACTTTAAGGAGACTTCGAATATTCTCGGCGCTAAATGGGAGTCTCTTAGCGCGGAAGAGAAGAAGCCTTACGAGGAGAGGTACAAG
GTGGAGAAGGAAGCTTACCTCCAGGTGGTTGCTAAGGAGAAGCGTGAGAGAGAGGCCATGAAGCTTCTTGATGATGAGCAGAAGCAGAAGACTG
CTATGGATTTGCTTGATCAGTATCTTCAGTTTGTGCAGGAAGGTGAACAGGATATAAAGAGGAAGAGCAAGAAGCAGAAGGATCCTCGGAAGCC
AAAGCATCCCATATCTGCCTTCCTGGTTTATTCCAACCAGAGGAGAGCTGAGTTACGTGAAGAGAACAAGAACGTTGTCGAGGTAGCAAAGATG
ACAGGAGAAGAGTGGAAGAAGTTGTCAGATAAACAAAAAGCACCCTTCGAAGAGGTGGCAAAGAAGAACAAGGAGACATACCTGGAAGCGATGG
AGGAGTACAAGAGAACGAAGGAAGAAGAGGCGATGAGCCAGAAGAAAGAAGAAGAGGAGCTCTTGAAACTCCACAAACAGGAAGCTCTCCAGCT
TCTTAAGAAGAAGGAGAAAACAGACAATCTGATCAAGAAGGAAAAAGAGACCAAGAAGAAGAAGAACGAAAACGTAGACCCAAACAAACCCAAG
AAGCCTGCTTCGTCATTCCTTCTCTTCAGCAAAGATGCAAGGAAGACTTTGACAGAAGAACGTCCTGGGACGAGCAACTCAACAGTTACCGCTC
TAATCTCAGTGAAATGGAAGGAATTGGGTGAAGAAGAGAAGCAAAGTTACAACAACAAAGCAGCAAAGTTGATGGAAGCATACAAGAAGGAACT
TGAAGATTACAACAAGAAGAGTGCTGCTGCGGCTACGACCAGTAGCTAGAAGAATTATCTATCTCTCTTTGAAATTGAAATAATGTTCAAGTCC
TGTTGAACATGTGACTCTTTATGCATTTTGTTAGAATCTGAAAACTCAAGTGATTTCTTCTATAAAAAGATTACTAGGTTTTATTC |
Primers for UN17278 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGAGACGCTGAGCAGGAGAG |
60.033 |
20 |
CGCCGAGAATATTCGAAGTC |
59.807 |
20 |
265 |
338 |
602 |
2 |
ACATGACGTTTGCTTGTGGA |
60.16 |
20 |
CTTCTTCTCTTCCGCGCTAA |
59.861 |
20 |
230 |
408 |
637 |
3 |
CATGACGTTTGCTTGTGGAC |
60.16 |
20 |
CTTCTTCTCTTCCGCGCTAA |
59.861 |
20 |
229 |
409 |
637 |
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