 |
Simple sequence repeat (SSR)
>UN17295
ACTCGGTCACTGACGAACCACTGAGTTAACTCGTTCCTTTGGAGGAGAGGTTTTGGTAGGCGACAACAAATGGAGGAGCTAGATCGTTCACGCG
CTTTCGCTAAAGACGTCAAGCGTATCGTCGTTAAGGTTGGAACCGCTGTTGTAACTGGGAAAGGTGGAAGATTGGCTCTTGGTCGCTTAGGAGC
TCTCTGTGAACAGCTTGCGGAATTAAACTCGGATGGATTTGAGGTGATATTGGTGTCATCTGGTGCGGTTGGTCTTGGCCGCCAAAGGCTTCGC
TACAGACAGTTAGTCAATAGCAGCTTTGCTGATCTTCAGAAGCCTCAGCATGAACTTGATGGGAAGGCTTGTGCTGGTGTTGGACAAAGCAGTC
TCATGGCTTATTATGAGACTATGTTTGACCAGCTTGATGTGACGGCGGCTCAGCTACTGGTGAATGACAGTAGCTTCAGAGACAAGGAGTTCAG
GAAGCAACTCAATGAGACAGTCAAGTCCATGCTTGATCTGAGGGTTATTCCTATTTTCAATGAGAATGATGCTATTAGCACCAGAAGAGCTCCT
TATCAGGATTCCTCTGGCATCTTTTGGGATAACGACAGCTTAGCTGCTCTATTGGCGCTGGGACTGAAGGCTGATCTTCTGATTCTTCTGAGTG
ATGTCGAAGGTCTTTACACTGGTCCTCCTAGTGATCCTAACTCAAAGCTGATCCACACGTTCATCAAGGAAAAACATCAAGATGAGATCACATT
TGGCGACAAGTCAAGACTAGGAAGAGGAGGCATGACTGCTAAAGTGAAAGCTGCAGTGAACGCAGCTTATGCTGGCATCCCTGTCATCATAACC
AGTGGGTATGCAGCTGAGAACATAGATAAAGTCCTTAGAGGACTGCGTGTTGGAACCTTGTTCCATCAAGATGCTCGTTTATGGGCTCCTATCA
CTGATTCTACTGCTCGTGACATGGCTGTTGCTGCAAGGGAAAGTTCCAGAAAGCTCCAGGCCTTATCTTCGGAAGATAGGAAACAAATACTGTA
TAGTATCGCCGATGCTCTTGAAGCAAATGAGAAAACAATCAGAGCTGAGAATGAATTAGATGTGGCTACAGCACAAGAAGCTGGACTTGAAGAG
TCATTGGTGGCTCGTTTGGTTATGACACCTGCAAAGATCTCGAGCCTTGCAGGTTCAGTTCGTAAGCTAGCTGATATGGAAGATCCAATTGGCC
GTGTTCTAAAGAAAACTGAGGTGGCAGATGGTCTTGTTTTGGAGAAGACATCATCCCCATTAGGCGTACTCTTGATTGTTTTTGAGTCTCGACC
TGATGCACTTGTACAGATTGCTTCACTTGCCATCCGAAGTGGAAATGGTCTTCTACTGAAGGGTGGAAAGGAGGCCAGGCGATCAAATGCTATC
TTACACAAGGTGATCACTGATGCAATTCCAGAGACTGTGGGTGGTAAACTCATTGGACTTGTGACTTCAAGGGAAGAGATTCCTGATTTGCTCA
AGCTTGATGACGTTATTGATCTTGTGATCCCAAGAGGCAGCAACCAGCTTGTTTCCCAGATTAAAAACACTACAAAAATCCCTGTTCTTGGTCA
TGCTGATGGAATCTGTCATGTATATGTCGACAAGGCTTGTAATGTGGATATGGCTAAGCGCATAGTTTCTGATGCAAAGTTGGATTATCCAGCA
GCTTGTAATGCCATGGAAACTCTTCTTGTGCATAAGGATCTGGAGCAGAATGCTGTGCTCAATGAGCTTATATTTGCTCTGCAGAGCAATGGAG
TCACTTTGTATGGTGGACCAAAGGCAAGTAAAATACTTAACCTACCAGAAGCACGGTCTTTCAATCATGAGTACTGTTCCAAGGCGTGCACTGT
TGAAGTTGTAGAAGACGTTTATGGTGCTATAGATCACATTCACAGACATGGGAGCGCACACACAGACTGTATTGTGACAGAGGATCCTGAAGTT
GCAGAGCTATTCCTTCGCCAAGTAGACAGTGCTGCTGTGTTCCACAATGCAAGCACAAGATTCTCTGATGGTTTTCGATTTGGACTTGGTGCTG
AGGTTGGGATAAGCACAGGCAGGATCCATGCTCGTGGTCCAGTGGGAGTCGAGGGATTACTTACAACCAGATGGATAATGAGAGGAAAAGGACA
AGTTGTGGATGGAGACAATGGGATTGCTTACACCCATCAAGACATCCCATCCAAGCTTAAAAAGACTTTTGTGTCAAAGTCTAGGAGAGGATGG
GCTTTTTGTTTCCTCTCTGTCTAATATCATATCCTATATTATAATTGTTATTGAAACCCTCTCTTATGAAGTGAAGTGGTTTTGATTTTAGAGT
TTAGGGATTGCACCAAAAATAAGTTCCTTTGTTCTGTTTGTTTTTACCACTTGGTCTTTGGCTCATAAGTAAGATATTGTAAGCTACACTTTTC
TTATTTATCAATTATTTGTTTGGATTTGCATTGTGAATCAAACCTTGATACAAAGTAGAAAATGAACTTAAAGTCATTACCATAAATTCTCAAA
GATTCTGTAAATGGGAAAAACACATGTATGCAAATAACGAACATAAACTCATTCATACATTTTGACCTTACCTATTACTCTTCCATAAACGTCT
TAACATTCTTCAACCAGAGCAAGTACTCTCTCTTCACTTTCCTCATCATGTACTGGTGCAAGAAGTTTGTAGTGCTTGCTTTCACTCCTCTAAT
CTCCAGATACTTGTAGAATGTCTTCTTCAGATTCTCGTCCAAGTACTCGAAATCAGGCCCTTCGTTCGCTAACTTATCCTCCAAAGTACTCCCC
TGATTGCTCACAGATAAAGCATCAATGGCAATCTCATCCGGGAAAGCCATACAGCTAAACTCTAAGCTGAGCCCGCTCTTCTTGGTAACAGTCA
CAACTAGTGGAATACTTGATCCATTGCTATGACCATCATCATCATCATCGTCCTCATCATCATTATCATCACCGTCAAGACTAGGCATACTTAC
TACAACTTTAATATGCTCCCCTTTGTAATCTCTAGTCAATGTTACAGTCTGATGCCCAGGATTGTCTTCAATTTTGAAAGGGAAGCTACCTGGA
GCCGTCTCTTCATCCAGATCGGGATCATCGATTTGGAGAGCAGTGTTGATCTCGGAGTCAATCACGCGGAGAAGCGATTGCTCGGAGCTTATCC
GATCATAGCCGTCGAGTAAAGGGCAAAGAGCGAACGGAGATGGGTTGCGAGCAGAGATGACTACGTAACACGGCGGAGATGACCGGACT |
Primers for UN17295 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCGCTCTTCTTGGTAACAG |
59.869 |
20 |
AAGACAATCCTGGGCATCAG |
60.073 |
20 |
185 |
2892 |
3076 |
| 2 |
CCCGCTCTTCTTGGTAACAG |
59.869 |
20 |
GCTCCAGGTAGCTTCCCTTT |
59.848 |
20 |
213 |
2892 |
3104 |
| 3 |
CGGGAAAGCCATACAGCTAA |
60.223 |
20 |
AAGACAATCCTGGGCATCAG |
60.073 |
20 |
218 |
2859 |
3076 |
|
|
