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Simple sequence repeat (SSR)
>UN17328
ATATTCTTCTTTGCATATTCTTCTTCCTCCTCTCACAACCAGAAAAGAAAAAAACAAGATGGTTCTAAGTCGAGCGGCCCGCGAAAGTGACGAA
AATGTTTGCTCGACGTTCGGATCTCGCTATGTCCGCACTTCACTGCCCAAGTATGAGATTGGTGAGGGCTCGATACCGAAGGAGGCTGCGTATC
AGATCATAAAAGATGAGCTGATGCTTGATGGTAACCCGAGGCTTAACCTGGCTTCCTTTGTGACGACATGGATGGAGCCTGAGTGTGACAAACT
CATTATGGAATCTATCAACAAGAACTACGTCGACATGGACGAGTATCCTGTCACTACCGAGCTCCAGAACCGATGTGTAAACATGATAGCTCGG
CTGTTCAATGCGCCGCTTGGGGAAACTGAGACCGCCATGGGAGTAGGCACTGTTGGGTCTTCGGAAGCCATCATGTTAGCCGGATTAGCCTTCA
AAAGGAATTGGCAGAACAAACGCAAAGCTGAGGGTAAACCCTATGACAAACCCAACATTGTCACCGGAGCCAATGTTCAAGTGTGCTGGGAGAA
ATTCGCTAGGTACTTCGAGGTGGAGCTAAAAGAAGTGAAGCTTAGTGAAGGTTACTACGTGATGGATCCAGATAAAGCAGCTGAAATGGTAGAC
GAGAACACAATCTGTGTTGCTGCCATACTTGGTTCCACACTCAACGGTGAGTTCGAAGACGTCAAGCGCCTTAATGACTTGCTGGTCAAGAAAA
ACGAAGAGACTGGCTGGAACACTCCAATCCACGTTGACGCAGCAAGTGGAGGCTTCATAGCTCCATTTATTTACCCTGACTTGGAATGGGACTT
TAGGCTTCCTTTGGTGAAGAGTATCAATGTGAGTGGTCATAAGTATGGGCTGGTCTATGCTGGTATTGGCTGGGTCGTGTGGAGGACACAACAG
GATTTGCCTGATGAGCTCATCTTTCATATCAACTATCTTGGTGCTGATCAACCCACTTTCACTCTCAATTTCTCCAAGGGATCGAGCCAAATTA
TTGCTCAATACTATCAGCTCATTCGTCTTGGCTTCGAGGGCTACAAGAACGTGATGGAGAACTGCAGAGAGAACATGGTGGTTCTAAGAGAAGG
GATAGAGAAAACAGAGCGTTTCAACATAGTCTCAAAGGAGATAGGAGTGCCACTCGTTGCCTTCTCTCTCAAGGACCACAGTTTCCACAACGAG
TTCGAGATCTCAGAGATGCTACGCCGTTTCGGCTGGATTGTCCCGGCTTACACCATGCCTGCGGATGCGCAACACATCACGGTTCTCCGTGTTG
TCATAAGGGAAGATTTCTCAAGAACACTTGCGGAGAGACTTGTGGCTGATATTGTGAAGGTGCTTCACGAGCTTGACACCTTGCCATCCAAGAT
ATCCAAGAAGATGGGAGCAGAGGATTTCGGAAATGTGAAAGGGAGAAGTGGAAAGGGACATCTGATGGAAGTCATTGTTGGATGGAGGAGTTGT
GAAGAGAGAGAGATGAATGTGTGTGTTAATCTGAAGTGTCTTCTGTTTGTGATTGAATGTATTAAATGTCATCTAATAAAAGAAGAGGTATGTG
TGTGTGTGAGAACTTGGAGTTTGATGAAGAGTTGTGTGTCTGGTATCCCATTTGAGACAATAATTGATTCTGGAATCTATTGTATGCTTGAAAC
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Primers for UN17328 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCACGAGCTTGACACCTTG |
60.025 |
20 |
TGGGATACCAGACACACAACTC |
59.891 |
22 |
269 |
1380 |
1648 |
| 2 |
CGGAAATGTGAAAGGGAGAA |
60.044 |
20 |
TGGGATACCAGACACACAACTC |
59.891 |
22 |
211 |
1438 |
1648 |
| 3 |
TTCGGAAATGTGAAAGGGAG |
60.044 |
20 |
TGGGATACCAGACACACAACTC |
59.891 |
22 |
213 |
1436 |
1648 |
|
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