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Simple sequence repeat (SSR)
>UN17427
AAAGGGTCTCTCAACCCATGCAAACGATCATATTTTGTAACTAAACAGAGTTGTATCGAGGAGAAATGGTCTTACATTATGACAATAACCATTT
GACTAATAAAGATACGAACCCAAAGAAAAGGAAGTGAATAACGTCTACCAAAACATGTATCAGGGTTCCATCTAAACTGAAAGATTGCAAAAGC
CGTTGGCAAATTTTAACTTAAAAGGAAGAAAAAAAACAATCATAGCGCAAAAAGCCATCCATCCAGATACTTGAGGTGGTGCTGCCTGTTAGAT
GGGACTGACATAGTTAGCAAACCTACCTTCATAAGAGGTGAGATCGGAAGGGAGCTTGGAAACGAGGCAAGCTGCAGCAACGACGCTGTGAAAT
GGCTGATGCGTGCTTAGTTCTCGCCGTAGCATAAACCTGGGAGCGGAAGAAGATTCAATTCGAGTCTGGCGAAGAGGGGACGATGAGGAATTGG
GGTTTGGGGAGGAGATTCTAGGTCTAGGTGGTGAGATCAAGCTTCTTCTGGTAGCGGATCTTAAGATGGAGGTTGACCTAGAAGCGATGCTCCT
TGCACTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAAAACCTACGATCTTCTTCGTCAAGATTCGAGTATGAAAGGAGGTAA
ATCAAAGACTGAAACCAGGAGCTCCAAGCTCTCTGTGGCCAAGAAGCCAGCTAAAGCAGCAGGTCGTAGCAAAGCGGCGGCTAAGGACCCTAAC
AAACCAAAGAGGCCTGCTAGTGCCTTCTTCGTTTTCATGGAGGACTTCCGTCAGACTTACAAGAAGGATCACCCCAACAACAAATCTGTTGCTG
CTGTTGGTAAAGCTGGTGGAGAAAAGTGGAAATCCTTGTCTGACTCTGAGAAGGCTCCCTTTGTAGCTAAGGCTGATAAGCGCAAGGTTGAGTA
TGAGAAGACCATGAAAGCCTACAACAAGAAGCTGGAGGAAGGCCCAAAGGAGGACGAGGAGGAATCTGACAAGTCCGTGTGAGGTGAATGATGA
GGATGATGCCGATGATGGTAGTGATGAGGAGGAAGACGATGACTAAAGAAGTTGAAGCTGGTAGCATAATAGGGGCGCTACAAAGATCTCTGGG
ATGTTTTTTTCTTTTTTATTTACTGATGTTTCAAGTTAGTAAGCTTGCCACTATCTCTCACTGATTCTGATTCTACGTGTAATGGAAAAAGTGT
GTAGACTGTTTGAATGAGAGATTTGCAGCTCTATGTAACAATTTAGCTTTTCGTTCTAAAATATGTTATCATCCCTTTCTTCACTATCTCAAAG
TTGCATGTTTTCACATGGCACGATGC |
Primers for UN17427 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGAGGGGACGATGAGGAAT |
59.896 |
20 |
CTTGGAGCTCCTGGTTTCAG |
59.982 |
20 |
239 |
448 |
686 |
2 |
CAAGCTTCTTCTGGTAGCGG |
60.147 |
20 |
CTTGGAGCTCCTGGTTTCAG |
59.982 |
20 |
179 |
508 |
686 |
3 |
GGTTGACCTAGAAGCGATGC |
59.843 |
20 |
CTTGGAGCTCCTGGTTTCAG |
59.982 |
20 |
146 |
541 |
686 |
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