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Simple sequence repeat (SSR)
>UN17566
GGAGTCAGAAAATGTGAAGAAATTATTTCATAGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTAGTAATACAGCATT
TAAACAAACAAATAGGATTACAAGAGTACACATGTAAAAAGTACATGAATAAAAGAACAGGTAAAGATACTAGGGGGCAGCGATTCGGATGGAT
AGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCTTCTAAGCATATGTAGGATTGAGTGCAATGGCTTCCCTGTAGATCATCTCTTTT
ATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGGCTTTAGACAGATTGGCTCATCATTTGGGTCGTGCAACTTGGCAAGGT
ACGGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGTCAACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATG
AGAGAAAAGTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGCCGGATGTATCTTTTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGAT
TCTGTCGGCGTGCCAAGCAACTCTGTCAATAAGCGCATCTGATGGACATGGTCTTTACCAGGGAACAAAGGCTTTCTGTTCATGAGCTCCATAA
AGATACAACCAACAGACCAAACATCTATAGCAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGCTCTGTACCATCTGGTAACAACATA
CTCGGTCATAAACTCGTTCTCCGAAGTCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTCGCGTTCAGGAGAAGATTGCTCGGT
TTTAGATCTCTGTGGATAACTTTAGCCGAGTGGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGTTCCTCAGACAAAC
CCTGGTTGGATCTGATGATTTGATGAAGATCAGTGTCCATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTGGAGGAAC
CACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGAAGAAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTGATTATCAAAG
GCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCAAAACAGAGCAAACGATGCCGTATGCGCCTCGACCGATTGGTACAA
TCGGAGGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCTTATGAACTGTCCTCCGTGCGTTTGCACCGCCGGAAACTC
TGGATATTGGCCGCCAGCGTTATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAATCGATCGATCGA
TCACGCGCTTAGTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTTGAGAGGTGGTGTC |
Primers for UN17566 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAGCTCGTTCGTCTCCGAAT |
59.978 |
20 |
TGAAGTTGACTAAGCGCGTG |
60.195 |
20 |
277 |
1155 |
1431 |
| 2 |
GTTCGTCTCCGAATCCAAAA |
60.051 |
20 |
TGAAGTTGACTAAGCGCGTG |
60.195 |
20 |
271 |
1161 |
1431 |
| 3 |
TTCGTCTCCGAATCCAAAAC |
60.051 |
20 |
TGAAGTTGACTAAGCGCGTG |
60.195 |
20 |
270 |
1162 |
1431 |
|
|
