 |
Simple sequence repeat (SSR)
>UN17619
CGTAGACGCTTCTTGCAAAGGAAAATAACATATTCATATTCAAAATACACGAAAACTTATTTAAATGGGTTCTTCTAGTAAGTTTTAGAGACAA
GACATCTACTTGCACAATCAAAACATTCACATACCCAAAATATCAAAAAAAGGTTCAGATAATATTTATAATCGTTTCTTTGCATCACAGCAGA
TACAATCATCTCGATGCAAATGCAACTCACCCTCATTACGCCTTGCCAGCGATGTTGTTGGACAGCCAGTCCAGACCTTCGTACAGTCCTTCAC
CTGAAGTGGCGCATGTGCTCTGAATGTACCAGTGACGCTGACGCAGGGAATGAAGGCCAAGCTTATCGGTGATTTCAGCTGCATTCATCGCATT
TGGAAGATCTTGCTTGTTGGCAAACACAAGCAACACAGCATCACGCAGCTCGTCCTCATTGAGCATCCTGTGCAGTTCATCTCTAGCTTCAACA
ACTCTGTCTCTGTCGTTGCTGTCCACGACAAAGATCAGACCCTGAGTGTTCTGGAAGTAGTGCCTCTACAAGGGACGGATCTTGTCCTGACCCC
CGACATCCCACACAGTGAAACTAATGTTCTTGTACTCCACAGTTTCCACATTGAAACCAATAGTGGGGATGGTGGTGACAATCTCACCGAGCTT
GAGCTTGTACAAGATAGTGGTCTTACCAGCAGCATCAAGACCAACCATCAGAATCCTCATCTCCTTCTTTGCAAAGAGCCTGCTAAACAGCTTT
GCGAAACTCAACCCCATCTTTCACTCTGTAGAATGTAACCGAGAGATCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGAAGCTA
AATTGTCGTTCGTTCGTCGCGTCGCAAGACGGACGCAGAACTAACCGTTTATCCTCGAGTTTCGTCTTCTGGGGTAGCTCAAAAGTTTTCTGCT
TTCTTCTTTCTATCTCCATGACACAGACTCAACGGGTCTTCCAAGCCTGGAAAGGAAGCAATAAGTTCATCCTTGGTGGGAGATTAATCTTCGG
TCCGGATGCTAGATCAGTTCCTGTTACCCTACTCCTCATCATAGTCCCTGTTATTTTATTCTGTGTCTTTGTAGCAAGGCATCTTCGCCATGAG
TTCTCTCCTTACAATGCTGGATACGCTATCTTGTTCGTTACACTTCTCTTCACTATTTATGTATTGATCCTCCTCTCCTTCACATCTGCACGAG
ATCCCGGTATCGTTCCACGAAACTCACATCCACCAGAGGAAGATCTACGCTACGAGACAACAGTAACACCAGACGGAAGACGAACACCGAGCGT
TCAGATTCCTAGAACAAAAGAAGTCATTGTTAACGGCGTTGCCGTTAGAGTGAAATACTGCGACACGTGCATGCTCTACAGACCTCCTCGCTGC
TCTCACTGTTCCATCTGCAACAACTGCGTCGAGCGCTTTGATCATCATTGCCCCTGGGTTGGCCAATGCATTGGCCAGAGAAACTACAGGTACT
TCTTTATGTTCGTCTCCTCAGCGACGCTTCTATGCATCTACGTGTTCTCCATGTCGGCTCTTTACATCAAGATTCTGATGGACCATCAGCACGG
AACCGTGTGGATGGCGATGAGAGAATCTCCTTGGTCGGTTGCGCTGATGGCGTATTGCTTTATCGGGTTGTGGTTCGTTGGAGGGCTCACGGGG
TTTCACCTGTACCTCATCAGCACGAACCAGACGACCTATGAGAATTTCCGGTACAGAGCAAACAGCAGGACCGTTGCTTATAACCGTGGCTGTG
CCAACAACTTTCTTGAGGTGTTTTGCACGAAGGTTAAGCCCTCGAGGAACAACTTTAGAGCTTTCGTCGAAGAAGAGCAGCATCCGAGAGGAGT
TGTTGTTGCTCTGCCAGCAACGACCACCACCGGAGAAGCAGCAGAGGATGAAAATGGAGGACGGAGAGAGAAAGTGGAGGACGATCTAGACATT
GGGGATGATTTGATGAATATATCGCAGCGGTGTAATCCAGCAGAGGGTAGCAATCACGGTTTGGATATTGACCAGTCGATTCTTGGGGTTGCTG
AGAGAGCGGCTACGATAAGGACAGAGACAAGGCATGGAAGCTGGGGAAGTGGAAGAAGTGGGAGCTGGGATATAGAAGCAGATGTGGGTAATTC
TAATGTCAGGGAGAGACCAAGCTAAAGATTTGGAGGTGGTCTCTTTTTTAGGACAGAAGTCAGAAGTATCTGATTTGGTTTTGGGGGGATTTGC
CAGTCAGTTCATGTAATCTTTTGAGTATAGTCCCTTTTCTAATCTTCTTTTCGCTTCCTTAATTGTGTAATAATTGTGATATTATGTTGATATT
ATGGTGGAATTCCATTTATGTATTTGCGTTG |
Primers for UN17619 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGCAAAGAGCCTGCTAAACA |
59.752 |
20 |
CCGTTGAGTCTGTGTCATGG |
60.154 |
20 |
248 |
728 |
975 |
| 2 |
TGCAAAGAGCCTGCTAAACA |
59.752 |
20 |
GACCCGTTGAGTCTGTGTCA |
59.712 |
20 |
251 |
728 |
978 |
| 3 |
TGCAAAGAGCCTGCTAAACA |
59.752 |
20 |
CGAAACTCGAGGATAAACGG |
59.702 |
20 |
183 |
728 |
910 |
|
|
