 |
Simple sequence repeat (SSR)
>UN17702
GGAAGAAAGAGAAACGCTTTTCAAGTTGTGTCTATCTGTCTCCACGATTCACGCCTTGAGTCTTGACCCCTCCTCCTCCTCATCATTTCCCCTC
TCTCAACAAAGCAATTCGTTCATCGTTGCGTTGGAGAAATCAACGAAGAGAGAGAGAAGATGAGTTTTCAAGATTTAGAAGCAGGGAAAGGAGG
AAGATCGAGGAAGATGAATGGAGGTGGTGGTCGCCAAGATTCGACGCAAGCCGTCGCTTCCGGTATCTTCCAGATCAATACCGGAGTCTCCACC
TTTCAGCGGCTCGTTAACACGCTCGGTACTCCCAAAGATACCCCCGAGCTCCGTGACAAGCTGCACAAGACACGGTTGCATATTGGTCAGCTTG
TGAAGGACACTTCTGCTAAGCTTAAAGAAGCTAGTGAAACTGATCATCGAACCCGTGTCAATCCAAGTAAGAAGATTGCAGATGCTAAGCTTGC
AAAGGACTTTCAAGCTGTGTTGAAAGAGTTTCAGAAAGCTCAACAGACTGCTGCTGAAAGAGAAACCGCTTATGCTCCTCTCCTCCCTCCTTCT
TCTCTTCCCTCTAGCTATACAGCGAGTGAAGTAGACAATATTCCTGAACAGAGGGCACAAGTTATGGAGTCAAAAAGGCAGGAACTTGTGTTGT
TAGACAACGAGATTGCATTCAACGAAGCTGTGATCGAAGAAAGAGAGCAAGGGATACAAGAAATCCACACTCAAATTGGCGAGGTTAACGAAAT
TTTCAAAGATCTTGCGGTTCTTGTTAACGATCAAGGAGTCATGATAGATGATATTGGTACTCACATTGACAACTCTCGAGCTGCAACTGCTCAA
GGAAAATCTCAGCTCGCTCAAGCCTCCAAAACCCAAAGATCAAACTCATTTCTGACATGCTTGCTCTTGGTGATATTTGGCATTGTACTCCTGA
TCGTGATCATCGTACTCGCAGCTTGATTTTGGAAAAGCAAGAACCAAGTCTTTCAATGTGTTCAACGAGTGAGTGCGACTACTTTGGTATATAT
AAGATAAATTTGCAGACAAAAAGCGTAGAAGTTGGGTTTTGTATTGGTTCGGTTTGAGGATTTATTGGTGAATGTAACAGAGTGCGTGTGTGTG
TGTTGTTTTCTTTGTGGTGCAAACTATTTGTTGCGAGATATTGATTTTTTTTTTTTCAAATGGTATTGAGAGTTGAGAGGAATCAAAAACGGTT
TGTCCAATGACTATCACAATTTACAAAGAAGACGAAAAGCTGATTCATAACTGCTTTGTGTTCTTACAAGATTCAACCTTTGAGCTCAAGATAG
ATGCAACAAGGATTGAAACTGCGGATAAAACCGCAGCAACAAATGTAACGACAGAAACATACTCGGTATGACTCCTGATTCCTGCAGGAATTTC
CCACACAACTGATCTGGTTTCGCTCTTCGAACGGCCAATGGACAAAACCAAACATCTTCTTTGTTCTTGTCCCTGGTTAGATACCGAGCACAGG
AACAAGTCTGGTTCTCCAAACTCCACTCTAGAGTATCCACTCTCCCCAATAGGCTGATACCGAGCATGTAAAGGAAGCTTAACGCTGATTTCAC
CATTTCCATTGATTTCGACATGAATCTCAACAACAGACCTGTTTGATCTGAACGAAGGCTGCTCGAGATCCGTGTCTCCAAACACAGATACGTC
TCTGAAAGCTCTACGTTGTTGAAGACTCTGAAGCTCAAAAGGATCAGCAAAAACACCCAAAGGCAACCGTTCAACGACCACAAGCTCGTGAAAC
TGAGACTTTGAGTGAAAAGGACGAAGCTTGATGGTTGTGAGTAGATGACGATGCGAACCTTCACCTGTTATGTCTCTGTGTTGTAGCATTGCTA
CAGCAGGAGCATCATCTTCATAAGAAATGTTCTCAGAACATTGTCGAAGACGCAGGAAGCTTCGAAACTCTGACTCGTTTAAGGAGGAGCTCTG
TGTCGTGAAATAGGACTGCATGACGTAATGATCCGAGATACAAAACGTGTCCGAATCGGACATTCCAACATGAGTAGTTGAGATGGAATTAAAG
CATGACATCGCGAAGAAGATGTAGATCGCGGATATCACTGATCTCCCGCGTTTGCTACCCATCGAATGGTTTTTCAAATCGTGAATTGGGAATG
AAAGAAAGGGGAGAGATAGAGAGAGACTAGATAACTCTGGATTCCTTTTGTTTCATCC |
Primers for UN17702 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGGTTTTGTATTGGTTCGG |
60.587 |
20 |
ATCCGCAGTTTCAATCCTTG |
60.074 |
20 |
276 |
1067 |
1342 |
| 2 |
TTGGTTCGGTTTGAGGATTT |
59.406 |
20 |
ATCCGCAGTTTCAATCCTTG |
60.074 |
20 |
265 |
1078 |
1342 |
| 3 |
TGGGTTTTGTATTGGTTCGG |
60.587 |
20 |
CCGCAGTTTCAATCCTTGTT |
60.11 |
20 |
274 |
1067 |
1340 |
|
|
