Simple sequence repeat (SSR)
>UN17800
AAAGGGAAACCATGAAAATAGATATCTCAAAGCATTGTACAATAATAACTGATGGAAGTACTAAAAAATACGATATCAAGCTAATCCAAAAACA
TAATTTCTCACACAGTATTACAAACTGAAACCTCAAAACAGCATGTATAAAAAAAACAAAAAGGTTTCAGGCAAAAAAACAAGCTTTTAAGCAG
CACCCTTTCCCTTCTTCTTCTGGATTTTCTTCTGGTAAAATTCCAGCTCTTTACCTTCCAAAATGTATCCATCACCACGTCCGCCCTGGCCGGG
CCTTGATGAAATGCAAGCCAACAAACGACCGCTCGCAAACTGGTCCTCAATGTGGGAATCAAGACTTCGTCCCTCTTGACGGCTCTCAATCTTT
CTCAGCACGTGGTTGCTCTTCTTCACCTCCTCAGGAGCAGCAGCAGCAGCAGCTGGAGCTGCTTCTACACCATCCTCTGCTTCCTTCTTGGCAA
AGGA |
Primers for UN17800 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTCTTGACGGCTCTCAATC |
59.95 |
20 |
CTTTGCCAAGAAGGAAGCAG |
60.125 |
20 |
119 |
354 |
472 |
| 2 |
TGGGAATCAAGACTTCGTCC |
60.05 |
20 |
GAAGGAAGCAGAGGATGGTG |
59.803 |
20 |
129 |
335 |
463 |
| 3 |
CCTCTTGACGGCTCTCAATC |
59.95 |
20 |
GAAGGAAGCAGAGGATGGTG |
59.803 |
20 |
110 |
354 |
463 |
|
|
