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Simple sequence repeat (SSR)
>UN17956
GCTTGAACCGAACATATCACCCAAGCAAGGCATAGTTCTAAAGGGGTGAAATATATGAATTCAAGTTCCAAGAGAAACCATTACACAACACAAC
ATGACACCAGAGCAACGACAATGAAGAAGAGAGAGAGAGAGAGGAGTAACAGTTAAGTGAAAACTCATACAGTAACGCACAACAATCAATGGTT
TGCTGCTAACAACTTGAAATCATTTTTTGTTTGTTTAACTAAGAAACTGCAGAGGAAACGCCGATACACCTGGAAGCACAGATACTATCACTCC
TCACTAGACAAGCAGACCGTTTCGCTGCTGCATTGCCTACTTGTGTTGTCTTCTGTGTTGTTGTTGATGATGATGATAACCCAGTCTCCTTGTT
TGGAGTCTGTGGAGGTGTAAACACCACAGAGGACGAAGACGGTTGGGCATGAACCAAATCAGCACCCTCGTCCTCTGATGAACACACCCGTTCT
CTGGGGAGTGAAGTGTACTTTCTCTGGACAGGTGGGGAGTTACGTTCCTCTTCATCTTCCTTGTGATCTTCAAGTCTGGCAAACTCTTGTTTGA
ACTGTTCAACTCCGCTTGGGTAAAGAAAATGAGAGTTGATGTTCTCTTCTCCTTGTAGATACTCTTGCAACATTTGTGGATGGTACTCCAAAAT
CTCTCTATACATGAGCTCTCTCACATCATCCCGAGTCAACTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCAT
GGATTCAGCAGCAGTTCAAAAGC |
Primers for UN17956 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACATATCACCCAAGCAAGGC |
59.962 |
20 |
GCGTTTCCTCTGCAGTTTCT |
59.621 |
20 |
238 |
12 |
249 |
2 |
CACCCAAGCAAGGCATAGTT |
60.132 |
20 |
GCGTTTCCTCTGCAGTTTCT |
59.621 |
20 |
232 |
18 |
249 |
3 |
ACCGAACATATCACCCAAGC |
59.82 |
20 |
GCGTTTCCTCTGCAGTTTCT |
59.621 |
20 |
243 |
7 |
249 |
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