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Simple sequence repeat (SSR)
>UN17964
AAAACAAAATCTAGAAATTGTATTAAATAGTTGGAACTAAAACAAAATTTGAAAGAAAAGCAAGCAGCAACCCAAACAAAAGTAACTCAACATT
CCACTACTCATGGAGACACTTTCTTATTCTTGATTGTCTTCACTCCTCTACGTGGGTTCGGTTTCACTTTCTTCTTCGTCTTCCTACTCGGAGA
CTCCCTCACTGGACCAGCCGGGATTCCTTTCTTCAGAGCACTTCCTCTTGGTGTAGCAGACGGAGGCAACCTCAAGTCTTGTGGAGGTAGAGGG
CAATGAGGCTTCCACACCAAATTGTTCTTCATCGCAAATCTTACTCTCTTTGAGCTCTTCTCACTGCTCGGGCCAGGTAAGCTCTTCTCTGCTG
CATCTCTGTTAACAGTAGCACCTTGCTCCACAACCTCTTTGTTCTCTCTTTTCCTCTTCTTGTTCTTCTTTATGGCTACTGGAACAGGTTCTGC
TTCTTCACAGACACTTGCAACCTCATCTTTCAGTGGTCCCATCTCGGATGCAATCTTCTCAAACTCCTCCCGAAGATCTGATATCATAGTCTCG
TCAACAGACTCATCTTTCTCACCATGACTGACAACAACATCAGCTCCCTTCTTCTTAGAACTTGAACACTTCTTCAAACTCTTCTTCTTCTTCT
TCTTCGAAGAAGACCCATTGGCAACAACCTCCTTAGACTCAGAAACAACTGCCTCAACAGCCATAGGAACCAGCTCAGGCACTTCATCCTTCTC
CCGAGAAGCTTCAGTGATGGAAACCACAACACCAGAGCTCAACATATCCTTCTCCAACTGCAAAACT |
Primers for UN17964 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTTCTCAAACTCCTCCCGA |
59.92 |
20 |
AGTGCCTGAGCTGGTTCCTA |
60.012 |
20 |
218 |
524 |
741 |
2 |
TCTTCTCAAACTCCTCCCGA |
59.92 |
20 |
GAAGGATGAAGTGCCTGAGC |
59.957 |
20 |
227 |
524 |
750 |
3 |
TCTTCTCAAACTCCTCCCGA |
59.92 |
20 |
ATGAAGTGCCTGAGCTGGTT |
59.874 |
20 |
222 |
524 |
745 |
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