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Simple sequence repeat (SSR)
>UN18139
GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCTGTATATATAAATTTAAAATACTAAAAAGAAGGAAAAAAAAGACAGAGTGTGAAATTGC
GAGAGATAATGACGAAATATGGTGAGCAGAGAGATTCTCCGGCTATAGCAGCTTCGACGGTCACCGCCGCAAAACGATTTTTGACTCCTGGAAG
ATTCGTGACGATCTTGTGTATAGTGAACCTGATAAATTACGTGGATCGAGGAGTGATTGCGAGTAATGGTGTTAACGGAAGCTCGAGGACTTGT
GATTCCAAAGGCCTTTGCTCTGCTGGCACTGGCATTCAAGGAGAGTTTGGGTTAAGCAACTTTCAAGATGGTCTTTTGTCTTGCCTTTATGGTT
GGTCTTCTTGTTGCTTCTCCCATCTTCGCTGCTCTCTCCAAAAGGTTCACTCCTTTTAAACTGATTGGTGTTGGACTAACTGTTTGGACTCTCG
CTGCTGTTGGTTGCGGCTTCTCTTACAACTTTTGGATGATTGCTGTTTTCCGAATGTTTGTTGGGGTTGGTGAAGCTTCCTTCATTAGTCTTGC
AGCACCTTACATCGATGATAGCGCTCCTGCTGCAAGGAAAAATCTGTGGCTTGGACTGTTCTACATGTGTATACCAGCAGGAGTTGCTCTTGGC
TACGTGTTTGGTGGATATGTTGGAAACCATCTTGGATGGCGTTGGGCGTTTTACATTGAGGCAATCGCAATGGCTTTCTTTGTTGTTTTGTCCT
TCTGTATCAAACCTCCACAGCTCAAAGGTTTTGCTGCTAAAGAATCGAAGAAACCCTCTCCGTCTATTGAAACGGTGGCTCTCACACATGCGGA
AGCTAAAGCCGTAACCCCCAAACCAAAGACTCAGAACCTGGTAGTCGTATTTGGAAAAGACATGAAGGCTCTTTTCAGCGAGAAAGTATTTATA
GTGAACGTTCTTGGCTACATCACCTACAACTTTGTGATCGGAGCTTACTCATATTGGGGACCAAAAGCTGGTTTTGGTATCTACCATATGAAAA
ACGCAGACATGGTTTTTGGAGGCCTTACTATCATCTGTGGTATCATTGGAACTTTAGGCGGAAGCTACGTACTTGATCGCATCAACGCTACACT
TCCAAACACCTTCAAGTTACTAGCGGCATCAACTTTATTCGGCGCAGCGTTTTGTTTCGTTGCTTTCTGCATGAAGAATATGTATGCATTCATC
GGTCTGTTCGCAGTGGGAGAGATTTTAATCTTTGCTCCACAGGCCCCGGTTAACTTTGTGTGTCTACATTGCGTTAGACCAAACTTGAGACCAC
TATCAATGGCTTCTTCAACTGTTTTGATCCATATCTTAGGAGATGTTCCTTCTTCTCCTCTGTATGGAAAAATGCAGGATCGTCTCAAAAACTG
GAGGACATCAACTCTTATTATTACTTCAATCCTCTTCCTCGCAGCTATTATATGGGGCATTGGGATATTTATGAATAGTGTGGACCGTTCTAAT
GAAAAGAGTGAAGATGAGGTCGAGGAGGAAGAGAAATTGGAAACCAAAGCAGACAACAACAACAACAACTCTGTTCCCGTCTAAAATTTTGAGG
ACATTTATCAATTTTTCTTCAACCACAAAATAAAAATTCTTTCGCATTTGTTCAGTTGAACTACAATTCATTTGATTCATTTTCTGTCTCCTTG
CTTCTTAATTTCTTTGGTGTACATAAACTAATTTTTTAATAATAAAATTTTGCTTTGATC |
Primers for UN18139 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGCAGCTATTATATGGGGC |
60.047 |
20 |
TTCAACTGAACAAATGCGAAA |
59.335 |
21 |
210 |
1449 |
1658 |
| 2 |
TGAGGTCGAGGAGGAAGAGA |
60.064 |
20 |
TTCAACTGAACAAATGCGAAA |
59.335 |
21 |
140 |
1519 |
1658 |
| 3 |
TGAAGATGAGGTCGAGGAGG |
60.34 |
20 |
TTCAACTGAACAAATGCGAAA |
59.335 |
21 |
146 |
1513 |
1658 |
|
|
