|
Simple sequence repeat (SSR)
>UN18297
CTTCCTTAGCATATCTGAGAGTCTATCCCTTCCTTTTCGGGATATTATTTTATTTACTACGCCGCGTGGAGGAGAGATGTCGTCGACGCCCTTT
CGCCGGAAGTCAATCGGAATCCACCCCTACTCTTCAACTTAAATCCCTTTTGATTCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTGCTTACTC
TTCAGATATTCTGCTCCAGTCTCGATTTTAGTAATCGAGGGATTCTGGTAGTTTAGAGGGTAGGTTCTAGGGTTTTTGAATTGATGGAGCCGCG
AGTCGGAAACAAGTTTCGGCTCGGGAGGAAGATCGGTAGTGGATCGTTCGGAGAGATCTACCTTGGTACCAATATACAGACGAATGAAGAAGTT
GCCATTAAACTTGAAAATGTGAAAACTAAGCATCCTCAGTTGCTGTATGAATCAAAATTGTATAAAGTATTACAAGGAGGAACCGGCGTCCCTA
ACCTTAAATGGTATGGTACTGAAGGGGACTATAACGTCCTTGTGATAGACTTGTTGGGGCCTAGCCTTGAAGATCTATTCAACTTCTGTAGTAG
GAAACTCTCACTTAAGACTGTACTAATGCTTGCAGATCAAATGATCAATCGCATTGAATTTGTTCATCAGAAGTCATTTTTACACCGGGACATC
AAGCCTGACAACTTTCTGATGGGTCTCGGGAGGCGCGCAAATCAGGTATATGTCATCGATTTTGGTCTGGCAAAGAAGTACAGAGACTCAAATA
ATCAGCATATTCCGTATAGGGAAAACAAAAACTTGACTGGAACTGCTAGATATGCCAGCATGAACACTCACCTTGGCATAGAACAAAGTCGTCG
AGATGATTTGGAGTCACTTGGATTTGTTCTCATGTATTTCTTAAAAGGAAGTCTTCCTTGGCAAGGACTGAAAGCTGGCAATAAGAAGCAAAAG
TATGAGAGAATCAGCGAAAAGAAAGTATCGACATCTATTGAGTCTTTGTGTCGAGGGTATCCATCTGAATTCGCTTCTTACTTCCATTATTGCC
GTTCCCTGAGATTCGACGACAAGCCAGACTATGCCTACCTGAAACGTCTTTTCCGTGACCTGTTTATTCGCGAAGCTTCCAGTTTGATTATGTA
TTTGATTGGACGATCTTGAAGTATTAGCAATCACAGATTTCTACTCCGCCTCCCCGTCCCCATGGCGCTGGAGTTGGTCCAAGCTCTGGCTTAC
CCCCTGCTATTGCTAGTGCGGAGAGGCCATCAGGTGGCGAGGAAGTTAGACCTTCTGGTTGGTTATTAGGAAACCCTAGACGAAGTTCTGGACA
TATTTTTAACTCAGGAGGCTTAGCTAAACAAAAGGCACCAGTTTCAAGTGATCCTGCAATATCTAAAGATGTAGTGTTATCTAGCTCGAGCTTT
CTCCGAGCAACTGGATCATCAAGACGTGCTGCTGTCTCCAGTAGTCTCGAGCCTGCAGTTCCTGGAACTGATTTTGAGCCATCAAAACCTCCAA
ACATTGAAGCTGGATCAAGCTCCAATCCAAAGATCCATGGTGGTCGAAGCTCACCTATCGTCGTCTCATCTGATAACAACAAGCTATCATCTCC
TTCAAGGGGAAATACTTCAGTCATGAAGAACTATGAGTCCAACCTTAAAGGGATCGAGAGTCTACATTTTTAAGTCGCTGCTGGGGATATCACT
GAACCAGTGAATGATCGTTAAACTTCCCCGGGACAAGTGTAAATTAAAAGAAAAGAAAACCCTTCTGTAGGCTCTCTCCCCCATGCATTACGTG
CATTTGTGTTTACAGGGAGAGTGCCTTTTACTTGTGCTGCTTTGTAAGCACTCTCAAATAACAAAAGATAAAGAAAAGACTCTGAAGAAAA |
Primers for UN18297 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCGGAATCCACCCCTACTC |
60.154 |
20 |
TCTCCGAACGATCCACTACC |
60.073 |
20 |
230 |
107 |
336 |
2 |
ATCGGAATCCACCCCTACTC |
60.154 |
20 |
GAAACTTGTTTCCGACTCGC |
59.859 |
20 |
193 |
107 |
299 |
3 |
CGGAATCCACCCCTACTCTT |
60.319 |
20 |
TCTCCGAACGATCCACTACC |
60.073 |
20 |
228 |
109 |
336 |
|
|