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Simple sequence repeat (SSR)
>UN18377
GGACTCGATAACCAACCACCGTGCGTCTCGACCTTTACCTTCCTTCTTTCTTTCTCTCTCTCTCAAAAACCCTAAATTCTTCTCAGGAGATCGA
TCGAATCCGTTAGTAATGGCGAATAGCAATCTTCCGCGAAGAATCATCAAGGAAACTCAACGTCTACTTAGTGAACCTGCGCCGGGGATAAGCG
CGTCTCCGTCAGAGGAAAATATGCGTTATTTCAATGTCATGATCCTTGGTCCTACCCAGTCTCCTTATGAAGGAGGAGTTTTCAAGTTGGAGCT
CTTTTTGCCTGAAGAATACCCTATGGCAGCTCCTAAAGTTAGGTTTCTCACCAAGATATACCATCCTAACATTGACAAGCTCGGAAGGATCTGC
CTTGACATACTGAAAGACAAGTGGAGTCCTGCGCTTCAAATAAGAACTGTCCTCTTGAGCATTCAAGCTCTTCTAAGTGCACCAAACCCAGATG
ATCCACTGTCTGAGAACATAGCTAAGCATTGGAAGAGTAATGAAGCAGAAGCCGTGGAGACAGCTAAGGAGTGGACTCGTCTATATGCAAGTGG
CGCTTGATGATGGAGTGCAAAAGGAGAACGATCGTTGTCATTTAAATAACATTATATATGGTGAAACTCTTAAGGTTTTCTTATCTGAATCCTT
TTTCTTAAAAAAAAAACTGGGGAAAAAGATTTGTACTCTCTGAATCTTCTTTGTATAACTAAAGAATTGAAGACTCGTTTATCCATGCAAACTA
ACGTTCTCC |
Primers for UN18377 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGCGTCTCGACCTTTACCTT |
59.875 |
20 |
CAGGCAAAAAGAGCTCCAAC |
59.993 |
20 |
272 |
22 |
293 |
| 2 |
TGCGTCTCGACCTTTACCTT |
59.875 |
20 |
CTGGGTAGGACCAAGGATCA |
59.92 |
20 |
226 |
22 |
247 |
| 3 |
TGCGTCTCGACCTTTACCTT |
59.875 |
20 |
TTCGCGGAAGATTGCTATTC |
60.31 |
20 |
113 |
22 |
134 |
|
|
