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Simple sequence repeat (SSR)
>UN18382
GGAACATAGAGGAGATCGCCAAAGATCCAACCATTCAATTCCAAAACATGGCGGCTTATAGCAATGAAGAAGGCATAACACGTACCCTTCTCTC
TCTCTCTGCTGTAACGTACGTGTCCTCTCAAATCGGGGTTACGGTCGTGGGCAGTGGCAATTGGGGAAGCGTTGCTGCTAAGCTCATCGCTTCT
AATGCCCTCAAGCTTCCTTCTTTCCATGATGAAGTTAGGATGTGGGTCTTTGAGGAAGTTCTCCCAAATGGTGAGAAGCTCACTGATGTAATCA
ACAAAACCAATGAAAATGTCAAGTATCTCCCTGGGATTAAGTTAGGAAGAAATGTTGTTGCAGATCCTGACCTTGAAAACGCAGTGAAGGAAGC
AAACATGTTGGTTTTTGTTACACCGCATCAATTCATGGGTGGTATATGCAAGAAGCTTAAGGGAAAGGTAACAGGAGAGGTTGAGGCTATATCT
CTTGTTAAAGGGATGGAAGTCAAGAAGGAAGGTCCCTGCATGATCTCTACTCTCATCTCCAAGGAACTTGGTATCAACTGTTGTGTTCTTATGG
GCGCTAACATCGCCAACGAGATTGCTGTGGAGAAGTTTAGCGAAGCAACGGTTGGTTACAGAGAGAGTAAAGAAATAGCTGACACTTGGGTTCA
GTTGTTTAGTACTCCCTATTTTATGGTCACACCGGTTCATGATGTTGAAGGAGTAGAGTTGTGTGGGACCTTGAAGAATGTTGTGGCTATTGCA
GCGGGTTTCGTTGATGGTTTGGATATGGGTAATAACACAAAGGCTGCAATCATGAGGATTGGTTTAAGAGAGATGAGAGCACTCTCGAAGCTTC
TGTTTCCATCTGTTAAAGACAGTACTTTCTTCGAGAGCTGTGGTGTAGCAGATGTCATAACAACTTGCTTAGGAGGAAGAAACAGAAGAGTAGC
AGAAGCATTTGCCCAAAGTGGAGGAAAAAGGTCTTTTGATGAGCTTGAAGCAGAGATGCTACAAGGGCAAAAGCTACAGGGTGTTTCCACGGCG
AGAGAGGTTTACGAGGTCTTGAACCACTGTGGATGGATGGAGATGTTTCCGCTGTTTTCAACGGTTCACCAAATCTGCACTGGTCGTCTTAAAC
CTGAAGCCATTGTTCATTACCGTGATCACAAAGCCTGATGATCACTCTTGATGGTCCCATTCAGCTGCAATGAATATTTCTGTGATGCGTTTTT
GTTTCTTTGAGAATGTTTTCTGGCGAGTTGGACCGGACCTTCTAGCTGGTTTAGAGGATCCTGTTCATTCAAAGTTTTTGGTGCAATTGAAATT
CAATTTGCTTGGATCGAACACAGTCATGTGCTCAATGTTGTAATCACTCTGAGTACTGAATTCGTTTATTAAATTTGAAAGATTCACG |
Primers for UN18382 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGATCGCCAAAGATCCAAC |
59.635 |
20 |
AAAGAAGGAAGCTTGAGGGC |
59.962 |
20 |
200 |
12 |
211 |
| 2 |
GAGATCGCCAAAGATCCAAC |
59.635 |
20 |
TTCCTCAAAGACCCACATCC |
59.903 |
20 |
234 |
12 |
245 |
| 3 |
GAGATCGCCAAAGATCCAAC |
59.635 |
20 |
TTGAGGGCATTAGAAGCGAT |
59.807 |
20 |
188 |
12 |
199 |
|
|
