Simple sequence repeat (SSR)
>UN18588
GGCACTCCAAAAACGATCGATCTATCTGAATCTTCTCATTTTCCCCCTTTTCTCCGTTTCATAGCTAGCTAGGGTTTTCGAGATGGGTCAGATC
CAGTACTCTGACAAATACTTCGACGATACTTTCGAGTACAGGCACGTCGTACTTCCTCCTGAAGTCGCCAAGCTTCTTCCCAAGAATCGTCTTC
TCTCCGAAAATGAGTGGCGTGCGATTGGGGTGCAGCAGAGCCGTGGATGGGTCCATTACGCCATTCATCGTCCAGAGCCACACATCATGTTGTT
CAGGAGGACTCTCAATTACCAGCAGCAGCAGCAGCAGGAGAACCAAGCTCAAAACCTGCTCGCTAAGTGAATCTGAGTTGTGCTGCGCTACAAA
CATTGGTTCTTGTTAGCTATTATGTTTCTTGTAAACATGGGTTTGTGAACCACAACCTCTAATAACTTTGTGTTCATGTTATCTATCCTTGGTT
GGAGAAAAACATGCGAGTGAATGAGTGATAATCTGACTACTTTGATGTTATGCATTGTCTTTGTTCATCATGGATTATATCTTTTTCTTTCTGC
CTCTTTGTT |
Primers for UN18588 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTCCATTACGCCATTCATC |
60.163 |
20 |
CACTCGCATGTTTTTCTCCA |
59.84 |
20 |
252 |
238 |
489 |
| 2 |
GGTCCATTACGCCATTCATC |
60.163 |
20 |
TTTGTAGCGCAGCACAACTC |
60.203 |
20 |
139 |
238 |
376 |
| 3 |
GGTCCATTACGCCATTCATC |
60.163 |
20 |
TAGCGCAGCACAACTCAGAT |
59.77 |
20 |
135 |
238 |
372 |
|
|
