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Simple sequence repeat (SSR)
>UN18627
GAAATAAATGTTGCCATTGCATCTTTTTGCCTTCCACTTATGGGTTCAGAATTTAAAACAGCTTTTGCCTACTTTCTTTTGCTTCCAATGCCAA
AGGAAACAAACAAAAAGAGGTTTTGATGACGAAGAAGAAGAAGAAACAACATAACTGTTAAGTAGATTTAAAAAGAAAAAAAGGTATCATAATC
AGTTCCCGTTGCATTGGCGAAGCACAACACCATTACTGCTACTTCCTTGCACTTGCTTCTTCTGGTTATGTGGGTTAATCCGGTCAAGTCCCCA
TATCCTTATGGTGCCATCATCACTAGCTGAAGCCATCATGTGAAGGTTCGTTGGGCTCCAGCCCACACAGTTAACCGCTCCTGCATGTCCTGGT
AGCTCAATGATTAACTTCCCTGTCGATCTGTGCCATATGTATACCTGAAGATCCTCGCTTCCACTAGCGATGAAACCTTGTTCATGGCCACCAA
AGCACGATCTGATGAGGAACCGTGAACGCTTGTGGCCTTTGTATCTCGTCACAATCTTGGGATCACTTTCGATACTCCATAGACGGATCTCCTG
GTTCTGGAGATTCACCAGCACATACTTGTTGTCGTTGGAAAGCGAGAACGAGGTAATGGTGTCTTCCTCTTCGATCAACCTCTCAAACGTCGCT
TCCCTATCGAACAGAGATATCACGGAGTCCTTGCACACACTCACAAGCCACTTTCCATCGTCGGTCATTGCTATATCCGATACCTTCTGCGTCC
TCTGACCTTTCCAGCATTCCATCTCTCTACCGTCTAAATCCCACATGCAGATGCTTCGGTCTGTCATCCCTGCGATGATTCCCTTCCCATCAGC
GTACCATCCGCAAGAAATGGGACCGATACCGCCGCCTTTCTCATACGTGTGAGCACAGTCTCCTGAATCAACATCCCACCGTCTGATAACCTCT
TCTGCTCCACATGTAAGGACCTGACGATCATCAGGACTCCACAAGACCGCAGTTACTGGCTTCTGGTGGCCCACAAGTTTATGCTTCAGTGACA
TGTGCCCATCTGCTTTGATCTCCCATATAATTGCGGTTTGATCTTTGGAAGATGAGGCTAAATATTTGCCATTATGCGAGAATTGCAAGAACCA
GACTTCATCAGTATGCGACTCCAAGATCTGAACAGTCTGAGAAGGGATTTGGTGCTTCCCGCATTGATGGTCAGAATACAAAGACAAATCACTA
TCCAACGTATTATGGAAAACACAAGCATTCCGCTGAATGTGAAGTGAATTCTCAACTAAAGTCTCCAACCTATTCTCTGGGATTATAACAGAAG
CAGGAAGCAAGCTCTGCAGTTCCTCGAGAACCTTCGACCTTGAACTCACATTCTCTTTGCCTTGACCCGAGGCGGAAGGTGGTGATATAAGAGA
TGAAGCGAGCTCGTGAACACGCTTCGTATTAATACGAAGAGGCTCAATCTCGTTCCTCAAGGTGCCTAGCGCTTCAGCTATCCTATCAAATCTC
AAAAGCTCTAAGAACTTCTGCTCTAGTAGCAAGAAGGACGCGGATTTGACAGCCTTCTCATCCACCAGACCGATCCTGTGCAACGTGACGACAC
TCTCATCCCATTTACCCTCCTTGACCTGCTGAAGAAACGTCTCCACGAAGGAACGATGCAGAGGGATCCCTGATTCTTC |
Primers for UN18627 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTTTGCCTTCCACTTATGGG |
59.931 |
20 |
TTGACCGGATTAACCCACAT |
60.051 |
20 |
251 |
25 |
275 |
| 2 |
CCATTGCATCTTTTTGCCTT |
60.074 |
20 |
TTGACCGGATTAACCCACAT |
60.051 |
20 |
262 |
14 |
275 |
| 3 |
TTTCTTTTGCTTCCAATGCC |
60.188 |
20 |
TTGACCGGATTAACCCACAT |
60.051 |
20 |
203 |
73 |
275 |
|
|
