 |
Simple sequence repeat (SSR)
>UN18647
AGGACTTTCCTTTTGCCTCCCTTCGACTTTCCTTTCCGAATTTCACTTTCCTCTTCTCACGAAAATTTCTCGATCGCTCGAGATGGATCTACCA
TCTTCCTCTGCTTCTTGATCTCTTACTTAGGTCTGTTATTTTCCCAGCTCTTTCAAGATGGAGGACAACACCAGGTCAGTTGCTTCCCTCATGG
ACTCCACATCATCCAAGATCCAGCAGCTCCAAAAGGCCTTTGCCGAGCTCGAAAGCCAGCGCGCCGTAACGCTTAATCTCAAGTGGAACGAACT
CGAGGAGCATTTTCACGGGCTCGAGAGGTCTTTGAAGAGACGGTTCCACGAGCTCGAGGATCAAGAGAAAGAGTACGAGACCAAAACAAGGAAG
GCTCAAGAGCTTCTGGAGAAGAAGAAAGCAGCCGTGGAGGCCAAGGAGAAGGCGTCGCTGGAGAGGCTTCAGAAGAAGAGAGACGCAGCTGTGT
TCGCCATCAACACTGCTTTGGATAAGTACAACAACAACAACAACAACGTCAAGAGTACAGAAGCCTTTGCTTCTGCTGCTGATGATGAGGATGT
GGATGGTACTGTGCAAGATGTTGTTGAGGTGAAGGCTTATCCACAGTTAGTGAAGCTGTGCAGGGATATGGACTCAGCGGGGCTACACAAGTTT
GTATCAGACAACCGCAAGAACCTTGTTCTACTAAAAGAAGAGATTCCTGTGGCGTTCAGGGCTGCGGCGAATCCGGCTAGTTTAGTGTTGGACG
CTTTGGAAGGGTTTTATCCACCACCAACCAGTGATGGGAAGAAAGACGCTAACCTCTTGGGAATGCGGAGGACTTGTGTCATGTTGATGGAGTG
CCTTGGCGTACTGTTGTATGGTCTGGACAGTAACTCCGTTGCTGATGTTCTCTCGGAAGATGTTAAGGATAGAGCTAAAGGTGTTGCGGAAGGA
TGGAGTCCACTGCTGGAGAGTCTTGACATGGATGCTGCTGGCAATGGTAACTCTTTGGAGGCTCATGCTTTCTTGCAATTGCTTGCCACTTTTG
GTGTTGTTTCCGAGTTTGAGGAGGATGAGATCTTGAAGCTGATCCCTATGGTATCACGTCGCCGTCAGGCTGCTGAGCTTTGCCGTTCTCTTGG
ATTGTCTCAAAAAATGCCTGGTGTGATTGAAGTTCTAGTGAACAGTGGTAAACAGATTGATGCTGTGAACTTGGCATTTGCGTTTGGACTCACC
GAACAGTTCCCACCTGTTGAGTTGCTTAAATGTTACTTGACTGAGGCAAGTAGATCTACCTCCCAAGGCAGACCTGGCAATGCATCTCCTGCTG
TTCAGGATGAGTTCAGTGAGAGGGAGCTGACGAGTCTTAAGGCTGTGATAAAGTGTGTGGAAGAGCATGACCTGGAAGAGCAGTACCCAGTTGA
GCCACTTCACAAAAGGATTCTCCAGCTGGAGAAGGCCAAAGCTGAGAAAAAGAGAGCAACGGAGCCCACAAAGCCTCAGACAAAGCGACCACGT
GGTCCTCAACCCCGGGCCACTGAAAACAACAACAATAACAACAATAACAGCAAGACAGGATATGGTAGAGTGTTACCTGAGAGGTATCCGCAGT
ATGTGTATGACAACAGACCTTTCCTTAGGGGTCCAATCATGGCAGCACAAGCTCATCCTCCTCCTCAGGCTTACAGTTTCAGTCCCGCTGCTGC
TGCTGCTCATGGGAACTTCTACGGAAACTGCTATCAGTACCAGGCTCCTCCTCCTGCTTACTTTCACTAAGGTTGATGGTGAATGTGACCGTAA
CTCTTTCTCTTCTATGGTGTTAACTAGTGGCAGCAGCTCTTTAACCCCTCCTCTCCTACTAGTCATTTTCCTTCGATGTTACATTGTTTGTTTT
GTATGGATGATTTTAGTATTTTTAAGGATCAACCCTACTCAAAACAAAAACAAAAATTATTTTTTTAAGTATGTATTTTTTTTAATC |
Primers for UN18647 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGAACTCGAGGAGCATTTTC |
59.955 |
20 |
CATCAGCAGCAGAAGCAAAG |
59.888 |
20 |
278 |
277 |
554 |
| 2 |
CCAAAACAAGGAAGGCTCAA |
60.22 |
20 |
TGAGTCCATATCCCTGCACA |
60.072 |
20 |
278 |
363 |
640 |
| 3 |
AGAAGAAGAAAGCAGCCGTG |
59.757 |
20 |
TGAGTCCATATCCCTGCACA |
60.072 |
20 |
248 |
393 |
640 |
|
|
