 |
Simple sequence repeat (SSR)
>UN18647
AGGACTTTCCTTTTGCCTCCCTTCGACTTTCCTTTCCGAATTTCACTTTCCTCTTCTCACGAAAATTTCTCGATCGCTCGAGATGGATCTACCA
TCTTCCTCTGCTTCTTGATCTCTTACTTAGGTCTGTTATTTTCCCAGCTCTTTCAAGATGGAGGACAACACCAGGTCAGTTGCTTCCCTCATGG
ACTCCACATCATCCAAGATCCAGCAGCTCCAAAAGGCCTTTGCCGAGCTCGAAAGCCAGCGCGCCGTAACGCTTAATCTCAAGTGGAACGAACT
CGAGGAGCATTTTCACGGGCTCGAGAGGTCTTTGAAGAGACGGTTCCACGAGCTCGAGGATCAAGAGAAAGAGTACGAGACCAAAACAAGGAAG
GCTCAAGAGCTTCTGGAGAAGAAGAAAGCAGCCGTGGAGGCCAAGGAGAAGGCGTCGCTGGAGAGGCTTCAGAAGAAGAGAGACGCAGCTGTGT
TCGCCATCAACACTGCTTTGGATAAGTACAACAACAACAACAACAACGTCAAGAGTACAGAAGCCTTTGCTTCTGCTGCTGATGATGAGGATGT
GGATGGTACTGTGCAAGATGTTGTTGAGGTGAAGGCTTATCCACAGTTAGTGAAGCTGTGCAGGGATATGGACTCAGCGGGGCTACACAAGTTT
GTATCAGACAACCGCAAGAACCTTGTTCTACTAAAAGAAGAGATTCCTGTGGCGTTCAGGGCTGCGGCGAATCCGGCTAGTTTAGTGTTGGACG
CTTTGGAAGGGTTTTATCCACCACCAACCAGTGATGGGAAGAAAGACGCTAACCTCTTGGGAATGCGGAGGACTTGTGTCATGTTGATGGAGTG
CCTTGGCGTACTGTTGTATGGTCTGGACAGTAACTCCGTTGCTGATGTTCTCTCGGAAGATGTTAAGGATAGAGCTAAAGGTGTTGCGGAAGGA
TGGAGTCCACTGCTGGAGAGTCTTGACATGGATGCTGCTGGCAATGGTAACTCTTTGGAGGCTCATGCTTTCTTGCAATTGCTTGCCACTTTTG
GTGTTGTTTCCGAGTTTGAGGAGGATGAGATCTTGAAGCTGATCCCTATGGTATCACGTCGCCGTCAGGCTGCTGAGCTTTGCCGTTCTCTTGG
ATTGTCTCAAAAAATGCCTGGTGTGATTGAAGTTCTAGTGAACAGTGGTAAACAGATTGATGCTGTGAACTTGGCATTTGCGTTTGGACTCACC
GAACAGTTCCCACCTGTTGAGTTGCTTAAATGTTACTTGACTGAGGCAAGTAGATCTACCTCCCAAGGCAGACCTGGCAATGCATCTCCTGCTG
TTCAGGATGAGTTCAGTGAGAGGGAGCTGACGAGTCTTAAGGCTGTGATAAAGTGTGTGGAAGAGCATGACCTGGAAGAGCAGTACCCAGTTGA
GCCACTTCACAAAAGGATTCTCCAGCTGGAGAAGGCCAAAGCTGAGAAAAAGAGAGCAACGGAGCCCACAAAGCCTCAGACAAAGCGACCACGT
GGTCCTCAACCCCGGGCCACTGAAAACAACAACAATAACAACAATAACAGCAAGACAGGATATGGTAGAGTGTTACCTGAGAGGTATCCGCAGT
ATGTGTATGACAACAGACCTTTCCTTAGGGGTCCAATCATGGCAGCACAAGCTCATCCTCCTCCTCAGGCTTACAGTTTCAGTCCCGCTGCTGC
TGCTGCTCATGGGAACTTCTACGGAAACTGCTATCAGTACCAGGCTCCTCCTCCTGCTTACTTTCACTAAGGTTGATGGTGAATGTGACCGTAA
CTCTTTCTCTTCTATGGTGTTAACTAGTGGCAGCAGCTCTTTAACCCCTCCTCTCCTACTAGTCATTTTCCTTCGATGTTACATTGTTTGTTTT
GTATGGATGATTTTAGTATTTTTAAGGATCAACCCTACTCAAAACAAAAACAAAAATTATTTTTTTAAGTATGTATTTTTTTTAATC |
Primers for UN18647 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCTCCTCCTCAGGCTTACA |
59.943 |
20 |
GGTTAAAGAGCTGCTGCCAC |
60.022 |
20 |
179 |
1654 |
1832 |
| 2 |
TCCTCCTCCTCAGGCTTACA |
59.943 |
20 |
AGGAGGGGTTAAAGAGCTGC |
59.848 |
20 |
185 |
1654 |
1838 |
| 3 |
ACCTTTCCTTAGGGGTCCAA |
59.799 |
20 |
AGTAAGCAGGAGGAGGAGCC |
59.979 |
20 |
140 |
1615 |
1754 |
|
|
