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Simple sequence repeat (SSR)
>UN01923
GGCCTAAATAATTTTTTATTATACAAGTTCCTAAAGGAGAGGAGAGAGCTGTTGTTATCATCGTTTAGAATCAGTTTCCCAAAAAACACCCAGA
GCTTTTTTTTCCTAAGAAAATGAGTTACATCAAAAGAGGAGCTATTTATTTATGAGAGAAACTTAGATTTCAACGGCGGTCAAGGCACCAGCAG
CGGTACTCTGATGTGGAGTTGTGGTACAGCTCTTCCGGCTTCATCTTCTCTAGATCGCTCTGTTTCCACGAGTTCAGTCCATCCCCTTCTTCTT
CTTCTTCTTTTTCTGCCTTTCCATGCTCTTGATCCCGCATTTTCTTGTACAGCCTCATCACAGATACACAGTCCTCGTACGGCTCGTGCTTCCC
GCATTGTATCTTGTATCCGAGATATGACCTTGTGAGGTACTTGAGTGATTGGCTTACAAGATTTGTTTTCATCAATGGCACGTATTTTGCTGTG
TCTCTCAACAGATGGCTAGGATACTGGAGTTTCAAGCATTTCATATCATGTCTAAGGTCATGACCAACAAGAAGAAGCCTCCCAACCCCATCAT
TATGTCCACCGCACAAGATGGTTAAAACTTTTTCTCGTACATCCTGAAGCCGCATACCATTATTCTTCAAATCTTCTTCGGTCAGTCCAGTTAC
CTTGTGTCTGTAATCGGTGACAGGGAGTTGGGGCTGGACGTGAGTAGAAAAGATGACATGCTCGTCTTCGTCAACGAGGCAAATAGATGCGCAG
AGATCAATAGACCCGTCATCACCACCACCAACCATTTCACAGTCAATTGCCACTGCCTTGAGACGTGAATTTACTACACCAAGAGTCCTAGTAG
GATTGACAAGAGGAAGAGGAAGAGGAAGAGGTGGAGAGAGGAGACACTTGTTTTGATGGTGAGCCAGAGCAGTGGCGTCGTCAAAGATTTGAAG
ACAGAGCGAACAGCCTCGTTCAGAGAAAATGGACTTGCAGTCACCTTTGAACAGATGGTCCGGAACGTTAAGGTGTTCCCGAACAGATTCGAAG
GATTTACAATGCTTGAAGCAAACCCCACAGCGAGGCTGATGAAGGGAATGGTGAGAAATCTTCATGTGCTCCACAAGGTGTTGGCGTCTATTGA
ACATCTTGTAGCAAGCAACGCATCTGTGCCTTATCTTGGCGGTTTTGGGAGACATCAGGGGAGGGACAATAGAAATCAAAGGCGATTCGCTGGT
TAAACCGTCCTGCTGCTGCTGCTGCTGCTGCTG |
Primers for UN01923 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TACAGCTCTTCCGGCTTCAT |
59.978 |
20 |
ACGTGCCATTGATGAAAACA |
59.972 |
20 |
247 |
213 |
459 |
2 |
TACAGCTCTTCCGGCTTCAT |
59.978 |
20 |
CAGCAAAATACGTGCCATTG |
60.133 |
20 |
256 |
213 |
468 |
3 |
CAGCGGTACTCTGATGTGGA |
59.855 |
20 |
ACGTGCCATTGATGAAAACA |
59.972 |
20 |
274 |
186 |
459 |
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