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Simple sequence repeat (SSR)
>UN18653
CATGCCTTTTTATTATAACCCTAATTAATTAAACTTTTGACGAAAATTCCTAAAATTAAAAAGAATACATATCAATCTCACCTCGTTATTAATA
AAATCTGATAGCCACAAAAAAAGGAAGAAGAATACATATCATTCCATATTTTACTAGACTGAAGATTTTTCTTGTTCTTGTTGACTCGTTGTGG
TTGGAGTATCTTCATCATTATCTTCAGACTTGCGCAAAGCTTGTCTGAGACCCAACACGATGAACAAATTGGTGAGAGCAAGAAGTGATTCAGC
TCCTCCATGTAACCAATCAACGTTTGACAATGATGTTCCATAATGCACCTTAGCATATATCCCAGCAGGTATTGTAGCTCCGACGAAGGCAAGC
AAGAAGTAGAATCCGAAAAGTGTGAGCTTCGGAGCAGTTTTGGATTTAGTGATGAAGTAGAGGAAACCTATGTATGGAAACAGAGACACCGCGA
AGAGCTGCGATGCTATGCTCTGTGAATCAATGGTTGGAGCCCAGGGGTCCACTGGAAACATCCCTCCTGCGTCACACACGATCGATACTCTGCC
ATCTTCTTCTCTTCTTCTTCTTCTTTTGTCTTTCGTCTCTGTCAAGTGTAAGAAGAAGCTTTTGTTCCTAGAGATCGAGATACTATGCTGAGAA
AGTCGTCGAGTGTTGAACGGAGACGAGCTCAGATATTTAACGGCTGAGATTATCGCCGGAGAGTAAGAGAGCATCAGAATCATCTTCTCTTTTT
CTCTTTTACTCTCACCCGTGTGGGTCC |
Primers for UN18653 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCGATGCTATGCTCTGTGAA |
60.127 |
20 |
GGCGATAATCTCAGCCGTTA |
60.196 |
20 |
239 |
477 |
715 |
2 |
GCGATGCTATGCTCTGTGAA |
60.127 |
20 |
ACTCTCCGGCGATAATCTCA |
59.797 |
20 |
246 |
477 |
722 |
3 |
AAGAGCTGCGATGCTATGCT |
60.286 |
20 |
GGCGATAATCTCAGCCGTTA |
60.196 |
20 |
246 |
470 |
715 |
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